RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 YEATS4O95619 227 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 KIF5BP33176 963 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
PREX2-201ENST00000288368 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 CA8P35219 290 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 IQCA1Q86XH1 822 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 BICD1Q96G01 975 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 TDRD12Q587J7 1177 aaKnown RBP12.77□□□□□ -0.36
PREX2-201ENST00000288368 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.36
PREX2-201ENST00000288368 HMGB1P09429 215 aaKnown RBP12.77□□□□□ -0.36
PREX2-201ENST00000288368 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.36
PREX2-201ENST00000288368 FAM114A1Q8IWE2 563 aa12.77□□□□□ -0.36
PREX2-201ENST00000288368 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.36
PREX2-201ENST00000288368 CKAP2LQ8IYA6 745 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
PREX2-201ENST00000288368 CETN1Q12798 172 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 CCT2P78371 535 aaKnown RBP12.77□□□□□ -0.37
PREX2-201ENST00000288368 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
PREX2-201ENST00000288368 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.37
PREX2-201ENST00000288368 CTR9Q6PD62 1173 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
PREX2-201ENST00000288368 GOLGA8AA7E2F4 631 aa12.77□□□□□ -0.37
PREX2-201ENST00000288368 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 SYNCQ9H7C4 482 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 ZNF444Q8N0Y2 327 aaPredicted RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 MCM4P33991 863 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
PREX2-201ENST00000288368 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
PREX2-201ENST00000288368 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 PUS7Q96PZ0 661 aaKnown RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 NLRP5P59047 1200 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 HLTFQ14527 1009 aaKnown RBP eCLIP12.75□□□□□ -0.37
PREX2-201ENST00000288368 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 ESPNB1AK53 854 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 TTF1Q15361 905 aaPredicted RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
PREX2-201ENST00000288368 TMC6Q7Z403 805 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
PREX2-201ENST00000288368 TRMT1LQ7Z2T5 733 aaKnown RBP12.74□□□□□ -0.37
PREX2-201ENST00000288368 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
PREX2-201ENST00000288368 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 MPHOSPH6Q99547 160 aaKnown RBP12.74□□□□□ -0.37
PREX2-201ENST00000288368 IKBKGQ9Y6K9 419 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 BIN1O00499 593 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 CTAGE5O15320 804 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
PREX2-201ENST00000288368 PDE4BQ07343 736 aa12.74□□□□□ -0.37
PREX2-201ENST00000288368 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
PREX2-201ENST00000288368 LMAN1P49257 510 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 PRDM10Q9NQV6 1147 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 ABCC5O15440 1437 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 ZNF213O14771 459 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 CCDC175P0C221 793 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
PREX2-201ENST00000288368 FERP16591 822 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 POLR3GO15318 223 aaPredicted RBP12.73□□□□□ -0.37
PREX2-201ENST00000288368 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 ASXL1Q8IXJ9 1541 aa12.73□□□□□ -0.37
PREX2-201ENST00000288368 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
PREX2-201ENST00000288368 POTEB2H3BUK9 544 aa12.72□□□□□ -0.37
PREX2-201ENST00000288368 ST5P78524 1137 aa12.72□□□□□ -0.37
PREX2-201ENST00000288368 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
PREX2-201ENST00000288368 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms