RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.49
TMED6-201ENST00000288025 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
TMED6-201ENST00000288025 N4BP2Q86UW6 1770 aaPredicted RBP12.01□□□□□ -0.49
TMED6-201ENST00000288025 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMED6-201ENST00000288025 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
TMED6-201ENST00000288025 DCAF5Q96JK2 942 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 PANK3Q9H999 370 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
TMED6-201ENST00000288025 KIF13BQ9NQT8 1826 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 IGSF1Q8N6C5 1336 aa12.01□□□□□ -0.49
TMED6-201ENST00000288025 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
TMED6-201ENST00000288025 CABP4P57796 275 aa12□□□□□ -0.49
TMED6-201ENST00000288025 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
TMED6-201ENST00000288025 GPBP1L1Q9HC44 474 aaPredicted RBP12□□□□□ -0.49
TMED6-201ENST00000288025 ATP10DQ9P241 1426 aa12□□□□□ -0.49
TMED6-201ENST00000288025 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
TMED6-201ENST00000288025 WWC3Q9ULE0 1092 aa11.99□□□□□ -0.49
TMED6-201ENST00000288025 KDRP35968 1356 aa11.98□□□□□ -0.49
TMED6-201ENST00000288025 RFC4P35249 363 aa11.98□□□□□ -0.49
TMED6-201ENST00000288025 MTHFSP49914 203 aa11.98□□□□□ -0.49
TMED6-201ENST00000288025 TRAPPC3LQ5T215 181 aa11.98□□□□□ -0.49
TMED6-201ENST00000288025 TK2O00142 265 aa11.97□□□□□ -0.49
TMED6-201ENST00000288025 MMP10P09238 476 aa11.97□□□□□ -0.49
TMED6-201ENST00000288025 ITPK1Q13572 414 aa11.97□□□□□ -0.49
TMED6-201ENST00000288025 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
TMED6-201ENST00000288025 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
TMED6-201ENST00000288025 TJP1Q07157 1748 aa11.97□□□□□ -0.49
TMED6-201ENST00000288025 CNTNAP4Q9C0A0 1308 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 FOXK1P85037 733 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 PLA2G2EQ9NZK7 142 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 PARP3Q9Y6F1 533 aa11.96□□□□□ -0.49
TMED6-201ENST00000288025 KDM6AO15550 1401 aaPredicted RBP11.95□□□□□ -0.5
TMED6-201ENST00000288025 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
TMED6-201ENST00000288025 SULT6B1Q6IMI4 303 aa11.95□□□□□ -0.5
TMED6-201ENST00000288025 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
TMED6-201ENST00000288025 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
TMED6-201ENST00000288025 BRCA1P38398 1863 aaKnown RBP11.95□□□□□ -0.5
TMED6-201ENST00000288025 ARFGEF1Q9Y6D6 1849 aa11.95□□□□□ -0.5
TMED6-201ENST00000288025 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
TMED6-201ENST00000288025 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
TMED6-201ENST00000288025 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
TMED6-201ENST00000288025 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
TMED6-201ENST00000288025 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
TMED6-201ENST00000288025 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
TMED6-201ENST00000288025 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
TMED6-201ENST00000288025 GPHNQ9NQX3 736 aaPredicted RBP11.93□□□□□ -0.5
TMED6-201ENST00000288025 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
TMED6-201ENST00000288025 C10orf71Q711Q0 1435 aa11.93□□□□□ -0.5
TMED6-201ENST00000288025 TBC1D12O60347 775 aa11.92□□□□□ -0.5
TMED6-201ENST00000288025 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
TMED6-201ENST00000288025 TGFB2P61812 414 aa11.92□□□□□ -0.5
TMED6-201ENST00000288025 ADCY9O60503 1353 aa11.92□□□□□ -0.5
TMED6-201ENST00000288025 HRO43593 1189 aa11.91□□□□□ -0.5
TMED6-201ENST00000288025 CRKLP46109 303 aaKnown RBP11.91□□□□□ -0.5
TMED6-201ENST00000288025 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
TMED6-201ENST00000288025 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
TMED6-201ENST00000288025 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
TMED6-201ENST00000288025 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
TMED6-201ENST00000288025 CRISPLD2Q9H0B8 497 aa11.91□□□□□ -0.5
TMED6-201ENST00000288025 ZPR1O75312 459 aa11.9□□□□□ -0.5
TMED6-201ENST00000288025 FCHSD2O94868 740 aa11.9□□□□□ -0.5
TMED6-201ENST00000288025 MRC1P22897 1456 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 HMOX1P09601 288 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 GYS1P13807 737 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
TMED6-201ENST00000288025 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
TMED6-201ENST00000288025 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
TMED6-201ENST00000288025 AFDNP55196 1824 aaKnown RBP11.88□□□□□ -0.51
TMED6-201ENST00000288025 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
TMED6-201ENST00000288025 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
TMED6-201ENST00000288025 PSEN2P49810 448 aa11.88□□□□□ -0.51
TMED6-201ENST00000288025 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
TMED6-201ENST00000288025 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
TMED6-201ENST00000288025 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
TMED6-201ENST00000288025 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
TMED6-201ENST00000288025 TNRC6CQ9HCJ0 1690 aaKnown RBP11.87□□□□□ -0.51
TMED6-201ENST00000288025 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
TMED6-201ENST00000288025 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
TMED6-201ENST00000288025 IL13P35225 146 aa11.87□□□□□ -0.51
TMED6-201ENST00000288025 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
TMED6-201ENST00000288025 COL15A1P39059 1388 aa11.87□□□□□ -0.51
TMED6-201ENST00000288025 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
TMED6-201ENST00000288025 DPEP1P16444 411 aa11.86□□□□□ -0.51
TMED6-201ENST00000288025 TEFQ10587 303 aa11.86□□□□□ -0.51
TMED6-201ENST00000288025 DSG2Q14126 1118 aa11.86□□□□□ -0.51
TMED6-201ENST00000288025 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
TMED6-201ENST00000288025 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
TMED6-201ENST00000288025 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 SCN7AQ01118 1682 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 NPHP1O15259 732 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms