RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 G2E3Q7L622 706 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
SCLT1-201ENST00000281142 CCDC94Q9BW85 323 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-201ENST00000281142 IL25Q9H293 177 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 CUL4AQ13619 759 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
SCLT1-201ENST00000281142 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.21
SCLT1-201ENST00000281142 MYRIPQ8NFW9 859 aa13.71□□□□□ -0.21
SCLT1-201ENST00000281142 RILPL2Q969X0 211 aa13.71□□□□□ -0.21
SCLT1-201ENST00000281142 SLIT2O94813 1529 aa13.71□□□□□ -0.21
SCLT1-201ENST00000281142 PDE4CQ08493 712 aa13.71□□□□□ -0.22
SCLT1-201ENST00000281142 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.22
SCLT1-201ENST00000281142 STRN4Q9NRL3 753 aa13.71□□□□□ -0.22
SCLT1-201ENST00000281142 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.22
SCLT1-201ENST00000281142 HCLS1P14317 486 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-201ENST00000281142 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
SCLT1-201ENST00000281142 LMOD3Q0VAK6 560 aa13.7□□□□□ -0.22
SCLT1-201ENST00000281142 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCLT1-201ENST00000281142 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 ADCY5O95622 1261 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 CBX1P83916 185 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
SCLT1-201ENST00000281142 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
SCLT1-201ENST00000281142 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
SCLT1-201ENST00000281142 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 KDRP35968 1356 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 EVA1CP58658 441 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-201ENST00000281142 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 NCAPD2Q15021 1401 aa13.68□□□□□ -0.22
SCLT1-201ENST00000281142 CHMLP26374 656 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-201ENST00000281142 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 ATP2B3Q16720 1220 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 AP5Z1O43299 807 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-201ENST00000281142 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
SCLT1-201ENST00000281142 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-201ENST00000281142 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-201ENST00000281142 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
SCLT1-201ENST00000281142 CHL1O00533 1208 aa13.66□□□□□ -0.22
SCLT1-201ENST00000281142 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
SCLT1-201ENST00000281142 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-201ENST00000281142 CRB1P82279 1406 aa13.66□□□□□ -0.22
SCLT1-201ENST00000281142 MX1P20591 662 aa13.65□□□□□ -0.22
SCLT1-201ENST00000281142 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
SCLT1-201ENST00000281142 HMMRO75330 724 aa13.65□□□□□ -0.22
SCLT1-201ENST00000281142 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
SCLT1-201ENST00000281142 MCM2P49736 904 aa13.65□□□□□ -0.23
SCLT1-201ENST00000281142 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.23
SCLT1-201ENST00000281142 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 FIBPO43427 364 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 MCCP23508 829 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 NECTIN2Q92692 538 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 PYCARDQ9ULZ3 195 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 PTPRCP08575 1304 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 AFF2P51816 1311 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 USP21Q9UK80 565 aa13.64□□□□□ -0.23
SCLT1-201ENST00000281142 CPA1P15085 419 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 CCDC183Q5T5S1 534 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 CARD10Q9BWT7 1032 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 MEGF6O75095 1541 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
SCLT1-201ENST00000281142 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 PHF14O94880 888 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 KCNF1Q9H3M0 494 aa13.63□□□□□ -0.23
SCLT1-201ENST00000281142 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
SCLT1-201ENST00000281142 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
SCLT1-201ENST00000281142 PRIMPOLQ96LW4 560 aa13.62□□□□□ -0.23
SCLT1-201ENST00000281142 PARP4Q9UKK3 1724 aaKnown RBP13.62□□□□□ -0.23
SCLT1-201ENST00000281142 IGSF3O75054 1194 aa13.62□□□□□ -0.23
SCLT1-201ENST00000281142 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
SCLT1-201ENST00000281142 GNAI2P04899 355 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 HMGN5P82970 282 aaKnown RBP13.61□□□□□ -0.23
SCLT1-201ENST00000281142 KIF3AQ9Y496 699 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 KDM4AO75164 1064 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 GTF2F1P35269 517 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCLT1-201ENST00000281142 ANAPC15P60006 121 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
SCLT1-201ENST00000281142 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms