RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 PAIP2Q9BPZ3 127 aaKnown RBP23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 HLTFQ14527 1009 aaKnown RBP eCLIP23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 KRT32Q14532 448 aa23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 A0A087WZG4 1122 aa23.49■■□□□ 1.35
CACNA1B-201ENST00000277549 CALML4Q96GE6 196 aa23.49■■□□□ 1.35
CACNA1B-201ENST00000277549 CRACR2AQ9BSW2 395 aa23.49■■□□□ 1.35
CACNA1B-201ENST00000277549 UTP14AQ9BVJ6 771 aaKnown RBP23.49■■□□□ 1.35
CACNA1B-201ENST00000277549 CNNM3Q8NE01 707 aa23.49■■□□□ 1.35
CACNA1B-201ENST00000277549 RAB34Q9BZG1 259 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 MPHOSPH6Q99547 160 aaKnown RBP23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 MVPQ14764 893 aaKnown RBP23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 KIF4BQ2VIQ3 1234 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 PPP1R14CQ8TAE6 165 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 UBAP1LF5GYI3 381 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 CALM1P0DP23 149 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 CALM2P0DP24 149 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 CALM3P0DP25 149 aa23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 ZSCAN31Q96LW9 406 aaPredicted RBP23.48■■□□□ 1.35
CACNA1B-201ENST00000277549 TMEM67Q5HYA8 995 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 TSHZ3Q63HK5 1081 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 SIRT1Q96EB6 747 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 MAP3K2Q9Y2U5 619 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 SH3BP5O60239 455 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 ATXN8OSP0DMR3 200 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 HSP90AA4PQ58FG1 418 aa23.47■■□□□ 1.35
CACNA1B-201ENST00000277549 MICU3Q86XE3 530 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 PKD2L1Q9P0L9 805 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 MRVI1Q9Y6F6 885 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 ATP2C2O75185 946 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 CCDC174Q6PII3 467 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 CIZ1Q9ULV3 898 aaPredicted RBP23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 NME9Q86XW9 330 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 SLC26A6Q9BXS9 759 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 STX8Q9UNK0 236 aa23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 URI1O94763 535 aaPredicted RBP23.46■■□□□ 1.35
CACNA1B-201ENST00000277549 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 TSPY3P0CV98 308 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 TSPY8P0CW00 308 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 TOP1P11387 765 aaKnown RBP23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 SPECC1Q5M775 1068 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 MX1P20591 662 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 KIF5CO60282 957 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 NAIPQ13075 1403 aa23.45■■□□□ 1.34
CACNA1B-201ENST00000277549 CSPG5O95196 566 aa23.44■■□□□ 1.34
CACNA1B-201ENST00000277549 GCOM1H8Y6P7 765 aaPredicted RBP23.44■■□□□ 1.34
CACNA1B-201ENST00000277549 MYZAPP0CAP1 466 aa23.44■■□□□ 1.34
CACNA1B-201ENST00000277549 HEATR3Q7Z4Q2 680 aa23.44■■□□□ 1.34
CACNA1B-201ENST00000277549 PRKG1Q13976 671 aa23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 LDHAL6AQ6ZMR3 332 aa23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 POLR3GO15318 223 aaPredicted RBP23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 RBM25P49756 843 aaKnown RBP23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 STAC3Q96MF2 364 aa23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 PPM1EQ8WY54 764 aa23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 GIGYF2Q6Y7W6 1299 aaKnown RBP23.43■■□□□ 1.34
CACNA1B-201ENST00000277549 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 KRT28Q7Z3Y7 464 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 MAATS1Q7Z4T9 603 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 KIF1BPQ96EK5 621 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 TBCAO75347 108 aaKnown RBP23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 FAM107BQ9H098 131 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 CETN1Q12798 172 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 TCHPQ9BT92 498 aa23.42■■□□□ 1.34
CACNA1B-201ENST00000277549 ANXA1P04083 346 aa23.41■■□□□ 1.34
CACNA1B-201ENST00000277549 HDAC9Q9UKV0 1011 aa23.41■■□□□ 1.34
CACNA1B-201ENST00000277549 PRDM10Q9NQV6 1147 aa23.41■■□□□ 1.34
CACNA1B-201ENST00000277549 BAG3O95817 575 aa23.41■■□□□ 1.34
CACNA1B-201ENST00000277549 SKAP1Q86WV1 359 aa23.41■■□□□ 1.34
CACNA1B-201ENST00000277549 NDC80O14777 642 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 RAB3IL1Q8TBN0 382 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 GRPEL1Q9HAV7 217 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 CCDC196A0A1B0GTZ2 297 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 PDE4BQ07343 736 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 ZSWIM4Q9H7M6 989 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 TFCP2L1Q9NZI6 479 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 TFIP11Q9UBB9 837 aaKnown RBP23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 FGFR1OPO95684 399 aaKnown RBP23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 NFE2L2Q16236 605 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 CCDC63Q8NA47 563 aa23.4■■□□□ 1.34
CACNA1B-201ENST00000277549 TCP11L1Q9NUJ3 509 aa23.39■■□□□ 1.34
CACNA1B-201ENST00000277549 UBXN4Q92575 508 aa23.39■■□□□ 1.34
CACNA1B-201ENST00000277549 RNF216Q9NWF9 866 aaPredicted RBP23.39■■□□□ 1.34
CACNA1B-201ENST00000277549 AFMP43652 599 aa23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 CDC5LQ99459 802 aaKnown RBP23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 SHTN1A0MZ66 631 aa23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 MFSD6Q6ZSS7 791 aa23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 GDPD2Q9HCC8 539 aa23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
CACNA1B-201ENST00000277549 PSMC4P43686 418 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 ARID5AQ03989 594 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 POGZQ7Z3K3 1410 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 IKBKGQ9Y6K9 419 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 OGFOD1Q8N543 542 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 PPP1R42Q7Z4L9 355 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 FERMT1Q9BQL6 677 aa23.38■■□□□ 1.33
CACNA1B-201ENST00000277549 STX6O43752 255 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms