RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
CT55-201ENST00000276241 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.42
CT55-201ENST00000276241 GNAI1P63096 354 aa17.7■□□□□ 0.42
CT55-201ENST00000276241 HLFQ16534 295 aa17.7■□□□□ 0.42
CT55-201ENST00000276241 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
CT55-201ENST00000276241 CLEC4GQ6UXB4 293 aa17.7■□□□□ 0.42
CT55-201ENST00000276241 CNBD1Q8NA66 436 aa17.7■□□□□ 0.42
CT55-201ENST00000276241 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
CT55-201ENST00000276241 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
CT55-201ENST00000276241 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
CT55-201ENST00000276241 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
CT55-201ENST00000276241 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
CT55-201ENST00000276241 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
CT55-201ENST00000276241 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
CT55-201ENST00000276241 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
CT55-201ENST00000276241 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CT55-201ENST00000276241 ANKRD31Q8N7Z5 1873 aa17.68■□□□□ 0.42
CT55-201ENST00000276241 KCNA3P22001 575 aa17.68■□□□□ 0.42
CT55-201ENST00000276241 ST5P78524 1137 aa17.68■□□□□ 0.42
CT55-201ENST00000276241 PDIA6Q15084 440 aa17.68■□□□□ 0.42
CT55-201ENST00000276241 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
CT55-201ENST00000276241 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
CT55-201ENST00000276241 C2CD5Q86YS7 1000 aa17.67■□□□□ 0.42
CT55-201ENST00000276241 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
CT55-201ENST00000276241 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
CT55-201ENST00000276241 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
CT55-201ENST00000276241 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
CT55-201ENST00000276241 HOXB7P09629 217 aa17.66■□□□□ 0.42
CT55-201ENST00000276241 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
CT55-201ENST00000276241 CCDC27Q2M243 656 aa17.66■□□□□ 0.42
CT55-201ENST00000276241 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
CT55-201ENST00000276241 ATP10DQ9P241 1426 aa17.66■□□□□ 0.42
CT55-201ENST00000276241 UTRNP46939 3433 aa17.66■□□□□ 0.42
CT55-201ENST00000276241 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
CT55-201ENST00000276241 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
CT55-201ENST00000276241 RGL2O15211 777 aa17.65■□□□□ 0.42
CT55-201ENST00000276241 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
CT55-201ENST00000276241 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
CT55-201ENST00000276241 NUP98P52948 1817 aa17.65■□□□□ 0.42
CT55-201ENST00000276241 GPTP24298 496 aa17.64■□□□□ 0.42
CT55-201ENST00000276241 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.42
CT55-201ENST00000276241 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.42
CT55-201ENST00000276241 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
CT55-201ENST00000276241 H0YIN7 160 aa17.64■□□□□ 0.41
CT55-201ENST00000276241 PDE6BP35913 854 aa17.64■□□□□ 0.41
CT55-201ENST00000276241 COPS6Q7L5N1 327 aa17.64■□□□□ 0.41
CT55-201ENST00000276241 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
CT55-201ENST00000276241 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
CT55-201ENST00000276241 UBN2Q6ZU65 1347 aa17.62■□□□□ 0.41
CT55-201ENST00000276241 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
CT55-201ENST00000276241 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
CT55-201ENST00000276241 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
CT55-201ENST00000276241 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
CT55-201ENST00000276241 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
CT55-201ENST00000276241 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
CT55-201ENST00000276241 DBF4Q9UBU7 674 aaPredicted RBP17.62■□□□□ 0.41
CT55-201ENST00000276241 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
CT55-201ENST00000276241 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
CT55-201ENST00000276241 ZNF784Q8NCA9 323 aaPredicted RBP17.61■□□□□ 0.41
CT55-201ENST00000276241 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
CT55-201ENST00000276241 TSPYL6Q8N831 410 aa17.6■□□□□ 0.41
CT55-201ENST00000276241 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
CT55-201ENST00000276241 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
CT55-201ENST00000276241 IL16Q14005 1332 aa17.6■□□□□ 0.41
CT55-201ENST00000276241 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
CT55-201ENST00000276241 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
CT55-201ENST00000276241 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
CT55-201ENST00000276241 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
CT55-201ENST00000276241 ZNF34Q8IZ26 560 aa17.58■□□□□ 0.41
CT55-201ENST00000276241 HYPKQ9NX55 129 aa17.58■□□□□ 0.41
CT55-201ENST00000276241 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.41
CT55-201ENST00000276241 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.41
CT55-201ENST00000276241 IBTKQ9P2D0 1353 aaPredicted RBP17.58■□□□□ 0.4
CT55-201ENST00000276241 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
CT55-201ENST00000276241 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
CT55-201ENST00000276241 ADCY9O60503 1353 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 NTSR2O95665 410 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 SRGNP10124 158 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
CT55-201ENST00000276241 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 MASTLQ96GX5 879 aa17.56■□□□□ 0.4
CT55-201ENST00000276241 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
CT55-201ENST00000276241 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
CT55-201ENST00000276241 RASSF7Q02833 373 aa17.55■□□□□ 0.4
CT55-201ENST00000276241 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
CT55-201ENST00000276241 PLBD2Q8NHP8 589 aa17.55■□□□□ 0.4
CT55-201ENST00000276241 STYK1Q6J9G0 422 aa17.55■□□□□ 0.4
CT55-201ENST00000276241 PRPF40BQ6NWY9 871 aaKnown RBP17.55■□□□□ 0.4
CT55-201ENST00000276241 ANKRD13DQ6ZTN6 518 aa17.55■□□□□ 0.4
CT55-201ENST00000276241 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
CT55-201ENST00000276241 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
CT55-201ENST00000276241 C21orf2O43822 256 aa17.54■□□□□ 0.4
CT55-201ENST00000276241 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
CT55-201ENST00000276241 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
CT55-201ENST00000276241 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
CT55-201ENST00000276241 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms