RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GOLGA8AA7E2F4 631 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 GOLGA8BA8MQT2 603 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 TTC31Q49AM3 519 aaPredicted RBP10□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
SCUBE3-201ENST00000274938 MACROD2A1Z1Q3 448 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 EBAG9O00559 213 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 DNA2P51530 1060 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 A0A1W2PRG0 241 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 BMP15O95972 392 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 ZSCAN23Q3MJ62 389 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 KIAA1107Q9UPP5 1409 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 PIP4K2BP78356 416 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 NBPF11Q86T75 865 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 SMC6Q96SB8 1091 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 IQCA1Q86XH1 822 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 PHF23Q9BUL5 403 aaPredicted RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 NAPBQ9H115 298 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 HMG20BQ9P0W2 317 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 CEP83Q9Y592 693 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 GJB2P29033 226 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 CUL5Q93034 780 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 UBA5Q9GZZ9 404 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 NOL3O60936 208 aaKnown RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 NOP2P46087 812 aaKnown RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 BMP2KLQ5H9B9 411 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 IQCGQ9H095 443 aaKnown RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 EXOC6BQ9Y2D4 811 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 FAM200AQ8TCP9 573 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 TMOD2Q9NZR1 351 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 NCOA2Q15596 1464 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 AKR1B10O60218 316 aa9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 PRPF4BQ13523 1007 aaKnown RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 RSRC1Q96IZ7 334 aaKnown RBP9.99□□□□□ -0.81
SCUBE3-201ENST00000274938 MICALL1Q8N3F8 863 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 ATRIPQ8WXE1 791 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 NKTRP30414 1462 aaKnown RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 BTBD11A6QL63 1104 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 IFIT1P09914 478 aaKnown RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 SKILP12757 684 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 LIG1P18858 919 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 KIF5BP33176 963 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 TMPOP42166 694 aaKnown RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 NLRP5P59047 1200 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 EVI5LQ96CN4 794 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 ZNF213O14771 459 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 TACC1O75410 805 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 MAP3K12Q12852 859 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 ANAPC4Q9UJX5 808 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 N4BP3O15049 544 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 ZSCAN29Q8IWY8 852 aaPredicted RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 OTUD6BQ8N6M0 293 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 CAPN2P17655 700 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 MXRA7P84157 204 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 PRAM1Q96QH2 718 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 NAP1L3Q99457 506 aaPredicted RBP9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
SCUBE3-201ENST00000274938 PABPN1LA6NDY0 278 aaKnown RBP9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 RARSP54136 660 aaKnown RBP9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 LRRC45Q96CN5 670 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 MYL6BP14649 208 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 OGFRQ9NZT2 677 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 CATIPQ7Z7H3 387 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 COMMD10Q9Y6G5 202 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 ATP2C2O75185 946 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 KRT83P78385 493 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 MKNK2Q9HBH9 465 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 LRPPRCP42704 1394 aaKnown RBP9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 ATP2A1O14983 1001 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 PIBF1Q8WXW3 757 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 CDK19Q9BWU1 502 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 SLC12A5Q9H2X9 1139 aa9.97□□□□□ -0.81
SCUBE3-201ENST00000274938 IARSP41252 1262 aaKnown RBP9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 UBASH3AP57075 661 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 DNAI1Q9UI46 699 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 TBC1D32Q96NH3 1257 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 POLR3DP05423 398 aaPredicted RBP9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 ZSCAN22P10073 491 aaPredicted RBP9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 PPFIBP2Q8ND30 876 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 TBC1D5Q92609 795 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 STIM2Q9P246 746 aa9.96□□□□□ -0.81
SCUBE3-201ENST00000274938 GNAT3A8MTJ3 354 aa9.96□□□□□ -0.82
SCUBE3-201ENST00000274938 CAVIN4Q5BKX8 364 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms