RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
CPNE9-201ENST00000273027 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
CPNE9-201ENST00000273027 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
CPNE9-201ENST00000273027 IL17RAQ96F46 866 aa12.35□□□□□ -0.43
CPNE9-201ENST00000273027 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
CPNE9-201ENST00000273027 LTN1O94822 1766 aa12.35□□□□□ -0.43
CPNE9-201ENST00000273027 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 NFAT5O94916 1531 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 TAF7Q15545 349 aaPredicted RBP12.34□□□□□ -0.43
CPNE9-201ENST00000273027 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
CPNE9-201ENST00000273027 MCM10Q7L590 875 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 NLRP2Q9NX02 1062 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
CPNE9-201ENST00000273027 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPNE9-201ENST00000273027 SDSP20132 328 aa12.33□□□□□ -0.44
CPNE9-201ENST00000273027 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
CPNE9-201ENST00000273027 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
CPNE9-201ENST00000273027 EYA1Q99502 592 aa12.33□□□□□ -0.44
CPNE9-201ENST00000273027 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
CPNE9-201ENST00000273027 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
CPNE9-201ENST00000273027 PDE1AP54750 535 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 KCNQ4P56696 695 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 HSP90AB4PQ58FF6 505 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
CPNE9-201ENST00000273027 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
CPNE9-201ENST00000273027 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
CPNE9-201ENST00000273027 PLEKHG2Q9H7P9 1386 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 XRCC6P12956 609 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPNE9-201ENST00000273027 HSPA6P17066 643 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 HOXC9P31274 260 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
CPNE9-201ENST00000273027 MEIS3Q99687 375 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
CPNE9-201ENST00000273027 NHSQ6T4R5 1651 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 IL2RBP14784 551 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 FLIIQ13045 1269 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
CPNE9-201ENST00000273027 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
CPNE9-201ENST00000273027 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
CPNE9-201ENST00000273027 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
CPNE9-201ENST00000273027 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
CPNE9-201ENST00000273027 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
CPNE9-201ENST00000273027 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
CPNE9-201ENST00000273027 CYP2E1P05181 493 aaPredicted RBP12.28□□□□□ -0.44
CPNE9-201ENST00000273027 IP6K1Q92551 441 aa12.28□□□□□ -0.44
CPNE9-201ENST00000273027 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
CPNE9-201ENST00000273027 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
CPNE9-201ENST00000273027 PAPPAQ13219 1627 aa12.27□□□□□ -0.44
CPNE9-201ENST00000273027 MX1P20591 662 aa12.27□□□□□ -0.45
CPNE9-201ENST00000273027 CLCN1P35523 988 aa12.27□□□□□ -0.45
CPNE9-201ENST00000273027 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.45
CPNE9-201ENST00000273027 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
CPNE9-201ENST00000273027 BTAF1O14981 1849 aa12.27□□□□□ -0.45
CPNE9-201ENST00000273027 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
CPNE9-201ENST00000273027 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
CPNE9-201ENST00000273027 ZNF445P59923 1031 aa12.26□□□□□ -0.45
CPNE9-201ENST00000273027 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
CPNE9-201ENST00000273027 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
CPNE9-201ENST00000273027 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
CPNE9-201ENST00000273027 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
CPNE9-201ENST00000273027 MBD3O95983 291 aa12.25□□□□□ -0.45
CPNE9-201ENST00000273027 CUL4AQ13619 759 aa12.25□□□□□ -0.45
CPNE9-201ENST00000273027 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
CPNE9-201ENST00000273027 HS1BP3Q53T59 392 aa12.25□□□□□ -0.45
CPNE9-201ENST00000273027 COL23A1Q86Y22 540 aaPredicted RBP12.25□□□□□ -0.45
CPNE9-201ENST00000273027 C16orf71Q8IYS4 520 aaPredicted RBP12.25□□□□□ -0.45
CPNE9-201ENST00000273027 TRIM44Q96DX7 344 aaPredicted RBP12.25□□□□□ -0.45
CPNE9-201ENST00000273027 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
CPNE9-201ENST00000273027 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
CPNE9-201ENST00000273027 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
CPNE9-201ENST00000273027 ERBB3P21860 1342 aa12.24□□□□□ -0.45
CPNE9-201ENST00000273027 POLA2Q14181 598 aa12.24□□□□□ -0.45
CPNE9-201ENST00000273027 QSER1Q2KHR3 1735 aa12.24□□□□□ -0.45
CPNE9-201ENST00000273027 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
CPNE9-201ENST00000273027 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
CPNE9-201ENST00000273027 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
CPNE9-201ENST00000273027 TTC41PQ6P2S7 1318 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
CPNE9-201ENST00000273027 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 G2E3Q7L622 706 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 PPP1R9BQ96SB3 815 aa12.23□□□□□ -0.45
CPNE9-201ENST00000273027 CHMLP26374 656 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 SSFA2P28290 1259 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 MTX1Q13505 466 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 SYAP1Q96A49 352 aaPredicted RBP12.22□□□□□ -0.45
CPNE9-201ENST00000273027 USP44Q9H0E7 712 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms