RNA–Protein interactions for RNA: ENST00000269385.8

CBX8-201, Transcript of chromobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX8, Length 3,791 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-201ENST00000269385 RNF20Q5VTR2 975 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 ADAMTSL3P82987 1691 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 HSP90AB3PQ58FF7 597 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 RRP15Q9Y3B9 282 aaKnown RBP19.17■□□□□ 0.66
CBX8-201ENST00000269385 BRPF1P55201 1214 aaPredicted RBP19.17■□□□□ 0.66
CBX8-201ENST00000269385 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
CBX8-201ENST00000269385 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
CBX8-201ENST00000269385 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
CBX8-201ENST00000269385 NRDCO43847 1150 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 HOMER1Q86YM7 354 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 UBXN4Q92575 508 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 DIP2AQ14689 1571 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
CBX8-201ENST00000269385 TNRQ92752 1358 aa19.16■□□□□ 0.66
CBX8-201ENST00000269385 SLU7O95391 586 aaKnown RBP19.16■□□□□ 0.66
CBX8-201ENST00000269385 BMP2KLQ5H9B9 411 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 CHD2O14647 1828 aaKnown RBP19.15■□□□□ 0.66
CBX8-201ENST00000269385 LRMPQ12912 555 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 LRCH2Q5VUJ6 765 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 CCDC192P0DO97 292 aa19.15■□□□□ 0.66
CBX8-201ENST00000269385 ZRSR1Q15695 479 aaKnown RBP19.15■□□□□ 0.66
CBX8-201ENST00000269385 ZNF853P0CG23 659 aa19.14■□□□□ 0.66
CBX8-201ENST00000269385 NOP2P46087 812 aaKnown RBP19.14■□□□□ 0.66
CBX8-201ENST00000269385 CCAR2Q8N163 923 aaKnown RBP19.14■□□□□ 0.66
CBX8-201ENST00000269385 ERO1AQ96HE7 468 aa19.14■□□□□ 0.66
CBX8-201ENST00000269385 SATB1Q01826 763 aa19.14■□□□□ 0.65
CBX8-201ENST00000269385 CXorf56Q9H5V9 222 aa19.14■□□□□ 0.65
CBX8-201ENST00000269385 LTKP29376 864 aa19.14■□□□□ 0.65
CBX8-201ENST00000269385 PPP2R5AQ15172 486 aa19.14■□□□□ 0.65
CBX8-201ENST00000269385 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
CBX8-201ENST00000269385 GIMAP7Q8NHV1 300 aa19.13■□□□□ 0.65
CBX8-201ENST00000269385 RGS12O14924 1447 aa19.13■□□□□ 0.65
CBX8-201ENST00000269385 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
CBX8-201ENST00000269385 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
CBX8-201ENST00000269385 USP48Q86UV5 1035 aa19.12■□□□□ 0.65
CBX8-201ENST00000269385 TERF2IPQ9NYB0 399 aa19.12■□□□□ 0.65
CBX8-201ENST00000269385 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.12■□□□□ 0.65
CBX8-201ENST00000269385 USP31Q70CQ4 1352 aa19.12■□□□□ 0.65
CBX8-201ENST00000269385 GADD45BO75293 160 aaPredicted RBP19.12■□□□□ 0.65
CBX8-201ENST00000269385 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
CBX8-201ENST00000269385 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
CBX8-201ENST00000269385 SUFUQ9UMX1 484 aa19.12■□□□□ 0.65
CBX8-201ENST00000269385 GOLGA6L19H0YKK7 550 aa19.11■□□□□ 0.65
CBX8-201ENST00000269385 ARHGAP29Q52LW3 1261 aa19.11■□□□□ 0.65
CBX8-201ENST00000269385 FILIP1Q7Z7B0 1213 aa19.11■□□□□ 0.65
CBX8-201ENST00000269385 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
CBX8-201ENST00000269385 RPAINQ86UA6 219 aa19.11■□□□□ 0.65
CBX8-201ENST00000269385 MCCP23508 829 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.1■□□□□ 0.65
CBX8-201ENST00000269385 CCDC34Q96HJ3 373 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 TRIM27P14373 513 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 NME9Q86XW9 330 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
CBX8-201ENST00000269385 CT47B1P0C2W7 299 aaPredicted RBP19.1■□□□□ 0.65
CBX8-201ENST00000269385 OS9Q13438 667 aaPredicted RBP19.1■□□□□ 0.65
CBX8-201ENST00000269385 ERCC6LQ2NKX8 1250 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 CARD10Q9BWT7 1032 aa19.1■□□□□ 0.65
CBX8-201ENST00000269385 PHRF1Q9P1Y6 1649 aaKnown RBP19.1■□□□□ 0.65
CBX8-201ENST00000269385 FAM208AQ9UK61 1670 aaKnown RBP19.09■□□□□ 0.65
CBX8-201ENST00000269385 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
CBX8-201ENST00000269385 USP6P35125 1406 aa19.09■□□□□ 0.65
CBX8-201ENST00000269385 MX1P20591 662 aa19.09■□□□□ 0.65
CBX8-201ENST00000269385 EXOSC9Q06265 439 aaKnown RBP19.09■□□□□ 0.65
CBX8-201ENST00000269385 IVLP07476 585 aa19.08■□□□□ 0.65
CBX8-201ENST00000269385 PPM1EQ8WY54 764 aa19.08■□□□□ 0.65
CBX8-201ENST00000269385 USP8P40818 1118 aa19.08■□□□□ 0.64
CBX8-201ENST00000269385 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.64
CBX8-201ENST00000269385 DNAJC21Q5F1R6 531 aaKnown RBP19.08■□□□□ 0.64
CBX8-201ENST00000269385 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.64
CBX8-201ENST00000269385 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
CBX8-201ENST00000269385 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
CBX8-201ENST00000269385 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.64
CBX8-201ENST00000269385 CCDC9Q9Y3X0 531 aaKnown RBP19.08■□□□□ 0.64
CBX8-201ENST00000269385 FCHSD2O94868 740 aa19.07■□□□□ 0.64
CBX8-201ENST00000269385 IBSPP21815 317 aaPredicted RBP19.07■□□□□ 0.64
CBX8-201ENST00000269385 SSR1P43307 286 aaKnown RBP19.07■□□□□ 0.64
CBX8-201ENST00000269385 RBM6P78332 1123 aaKnown RBP19.07■□□□□ 0.64
CBX8-201ENST00000269385 KCNF1Q9H3M0 494 aa19.07■□□□□ 0.64
CBX8-201ENST00000269385 LCMT1Q9UIC8 334 aa19.07■□□□□ 0.64
CBX8-201ENST00000269385 KIF2CQ99661 725 aa19.07■□□□□ 0.64
CBX8-201ENST00000269385 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
CBX8-201ENST00000269385 OAS2P29728 719 aaKnown RBP19.06■□□□□ 0.64
CBX8-201ENST00000269385 RDXP35241 583 aaKnown RBP19.06■□□□□ 0.64
CBX8-201ENST00000269385 C1orf115Q9H7X2 142 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 LTN1O94822 1766 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 H0YHG0 523 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 SARNPP82979 210 aaKnown RBP19.06■□□□□ 0.64
CBX8-201ENST00000269385 ATP6V1DQ9Y5K8 247 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 DIAPH1O60610 1272 aaKnown RBP19.06■□□□□ 0.64
CBX8-201ENST00000269385 NUCB1Q02818 461 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 SRLQ86TD4 932 aa19.06■□□□□ 0.64
CBX8-201ENST00000269385 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms