RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 TRMT1Q9NXH9 659 aaKnown RBP11.87□□□□□ -0.51
PHF3-201ENST00000262043 FSIP1Q8NA03 581 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 DYDC1Q8WWB3 177 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
PHF3-201ENST00000262043 NOS1P29475 1434 aa11.87□□□□□ -0.51
PHF3-201ENST00000262043 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
PHF3-201ENST00000262043 ISM2Q6H9L7 571 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
PHF3-201ENST00000262043 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 CUL5Q93034 780 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
PHF3-201ENST00000262043 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
PHF3-201ENST00000262043 TFIP11Q9UBB9 837 aaKnown RBP11.86□□□□□ -0.51
PHF3-201ENST00000262043 BIN1O00499 593 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 VPS36Q86VN1 386 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 CPLX3Q8WVH0 158 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHF3-201ENST00000262043 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 CETN2P41208 172 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 ANAPC15P60006 121 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 C16orf45Q96MC5 204 aaPredicted RBP11.85□□□□□ -0.51
PHF3-201ENST00000262043 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 STX6O43752 255 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
PHF3-201ENST00000262043 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
PHF3-201ENST00000262043 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
PHF3-201ENST00000262043 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
PHF3-201ENST00000262043 CCDC194A0A1B0GVG4 234 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 HAND2P61296 217 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 STX1AQ16623 288 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 TTC21BQ7Z4L5 1316 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 RPRD2Q5VT52 1461 aaKnown RBP11.84□□□□□ -0.51
PHF3-201ENST00000262043 CBX1P83916 185 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
PHF3-201ENST00000262043 LUZP1Q86V48 1076 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
PHF3-201ENST00000262043 TMC6Q7Z403 805 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
PHF3-201ENST00000262043 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
PHF3-201ENST00000262043 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
PHF3-201ENST00000262043 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 TNNT1P13805 278 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 MCM3P25205 808 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 TDRD12Q587J7 1177 aaKnown RBP11.83□□□□□ -0.52
PHF3-201ENST00000262043 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 CCDC91Q7Z6B0 441 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
PHF3-201ENST00000262043 ADCY5O95622 1261 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 MICU3Q86XE3 530 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
PHF3-201ENST00000262043 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
PHF3-201ENST00000262043 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 RAB11FIP4Q86YS3 637 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 PIK3R4Q99570 1358 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 MAP3K1Q13233 1512 aa11.83□□□□□ -0.52
PHF3-201ENST00000262043 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
PHF3-201ENST00000262043 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
PHF3-201ENST00000262043 NSD2O96028 1365 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 FANCAO15360 1455 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 IGHDP01880 384 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 MTIF2P46199 727 aaKnown RBP11.82□□□□□ -0.52
PHF3-201ENST00000262043 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 GRIN2AQ12879 1464 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
PHF3-201ENST00000262043 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 YEATS4O95619 227 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 LIG1P18858 919 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 BAG4O95429 457 aaKnown RBP11.82□□□□□ -0.52
PHF3-201ENST00000262043 PANK2Q9BZ23 570 aa11.82□□□□□ -0.52
PHF3-201ENST00000262043 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 MACROD2A1Z1Q3 448 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms