RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 JAKMIP1Q96N16 626 aaKnown RBP23.24■■□□□ 1.31
SCARB1-201ENST00000261693 HYPKQ9NX55 129 aa23.24■■□□□ 1.31
SCARB1-201ENST00000261693 PA2G4Q9UQ80 394 aaKnown RBP23.24■■□□□ 1.31
SCARB1-201ENST00000261693 KIAA2012Q0VF49 1180 aa23.24■■□□□ 1.31
SCARB1-201ENST00000261693 GLRX3O76003 335 aaKnown RBP23.23■■□□□ 1.31
SCARB1-201ENST00000261693 KCNA6P17658 529 aa23.23■■□□□ 1.31
SCARB1-201ENST00000261693 UBE2HP62256 183 aa23.23■■□□□ 1.31
SCARB1-201ENST00000261693 CEMIPQ8WUJ3 1361 aa23.23■■□□□ 1.31
SCARB1-201ENST00000261693 GJB2P29033 226 aa23.23■■□□□ 1.31
SCARB1-201ENST00000261693 ADCY9O60503 1353 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 HSP90AB4PQ58FF6 505 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 CLASRPQ8N2M8 674 aaKnown RBP23.22■■□□□ 1.31
SCARB1-201ENST00000261693 ADCY5O95622 1261 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 DNM1Q05193 864 aaKnown RBP23.22■■□□□ 1.31
SCARB1-201ENST00000261693 FAM184AQ8NB25 1140 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 PDRG1Q9NUG6 133 aa23.22■■□□□ 1.31
SCARB1-201ENST00000261693 BTBD11A6QL63 1104 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 PLCB2Q00722 1185 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 ZMYND15Q9H091 742 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 TEFQ10587 303 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 GIMAP6Q6P9H5 292 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
SCARB1-201ENST00000261693 TTC41PQ6P2S7 1318 aa23.21■■□□□ 1.31
SCARB1-201ENST00000261693 DNTTIP2Q5QJE6 756 aaKnown RBP23.2■■□□□ 1.3
SCARB1-201ENST00000261693 TTC12Q9H892 705 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-201ENST00000261693 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 SASS6Q6UVJ0 657 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 C17orf53Q8N3J3 647 aaPredicted RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 RUFY2Q8WXA3 655 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 LRRC59Q96AG4 307 aaKnown RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 RBM33Q96EV2 1170 aaKnown RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 ARID3AQ99856 593 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 VPS37CA5D8V6 355 aaPredicted RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 IFIT2P09913 472 aaKnown RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 CWF19L2Q2TBE0 894 aaKnown RBP23.19■■□□□ 1.3
SCARB1-201ENST00000261693 UVSSAQ2YD98 709 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 ECHDC1Q9NTX5 307 aa23.19■■□□□ 1.3
SCARB1-201ENST00000261693 LTN1O94822 1766 aa23.18■■□□□ 1.3
SCARB1-201ENST00000261693 MTMR6Q9Y217 621 aa23.18■■□□□ 1.3
SCARB1-201ENST00000261693 ATP6V1DQ9Y5K8 247 aa23.18■■□□□ 1.3
SCARB1-201ENST00000261693 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
SCARB1-201ENST00000261693 CYP46A1Q9Y6A2 500 aa23.18■■□□□ 1.3
SCARB1-201ENST00000261693 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-201ENST00000261693 AACSQ86V21 672 aa23.17■■□□□ 1.3
SCARB1-201ENST00000261693 IP6K1Q92551 441 aa23.17■■□□□ 1.3
SCARB1-201ENST00000261693 COL9A3Q14050 684 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-201ENST00000261693 VPS53Q5VIR6 699 aa23.17■■□□□ 1.3
SCARB1-201ENST00000261693 LETM1O95202 739 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-201ENST00000261693 ST3GAL1Q11201 340 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 ME3Q16798 604 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-201ENST00000261693 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 HOXB7P09629 217 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 KCNJ4P48050 445 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 FAM227BQ96M60 508 aa23.16■■□□□ 1.3
SCARB1-201ENST00000261693 ZSWIM6Q9HCJ5 1215 aa23.15■■□□□ 1.3
SCARB1-201ENST00000261693 DBF4Q9UBU7 674 aaPredicted RBP23.15■■□□□ 1.3
SCARB1-201ENST00000261693 CHMP3Q9Y3E7 222 aa23.15■■□□□ 1.3
SCARB1-201ENST00000261693 CRYBG1Q9Y4K1 1723 aa23.15■■□□□ 1.3
SCARB1-201ENST00000261693 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
SCARB1-201ENST00000261693 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.3
SCARB1-201ENST00000261693 GPATCH3Q96I76 525 aa23.14■■□□□ 1.3
SCARB1-201ENST00000261693 DYNC1I1O14576 645 aa23.14■■□□□ 1.29
SCARB1-201ENST00000261693 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
SCARB1-201ENST00000261693 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
SCARB1-201ENST00000261693 SLIT1O75093 1534 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 KDM4AO75164 1064 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 MTX1Q13505 466 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 TCEANC2Q96MN5 208 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 RBM8AQ9Y5S9 174 aaKnown RBP23.13■■□□□ 1.29
SCARB1-201ENST00000261693 CCDC171Q6TFL3 1326 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 NECTIN1Q15223 517 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 FERMT3Q86UX7 667 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 CCDC8Q9H0W5 538 aaPredicted RBP23.13■■□□□ 1.29
SCARB1-201ENST00000261693 TPCN1Q9ULQ1 816 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
SCARB1-201ENST00000261693 ZKSCAN1P17029 563 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-201ENST00000261693 NOLC1Q14978 699 aaKnown RBP eCLIP23.12■■□□□ 1.295e-9■■■■■ 28.5
SCARB1-201ENST00000261693 EVI5LQ96CN4 794 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 CREB3L3Q68CJ9 461 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-201ENST00000261693 PIBF1Q8WXW3 757 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 ZSCAN31Q96LW9 406 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-201ENST00000261693 FUCA2Q9BTY2 467 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 SH2B1Q9NRF2 756 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-201ENST00000261693 AP5Z1O43299 807 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 NMIQ13287 307 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-201ENST00000261693 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 FAM173BQ6P4H8 233 aa23.12■■□□□ 1.29
SCARB1-201ENST00000261693 MED1Q15648 1581 aaPredicted RBP23.11■■□□□ 1.29
SCARB1-201ENST00000261693 AIMP1Q12904 312 aaKnown RBP23.11■■□□□ 1.29
SCARB1-201ENST00000261693 SIL1Q9H173 461 aa23.11■■□□□ 1.29
SCARB1-201ENST00000261693 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
SCARB1-201ENST00000261693 TM6SF1Q9BZW5 370 aa23.11■■□□□ 1.29
SCARB1-201ENST00000261693 TLR7Q9NYK1 1049 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms