RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ZDHHC3Q9NYG2 299 aa10.16□□□□□ -0.78
TRA2B-201ENST00000259043 CDK2AP1O14519 115 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 FAM157BP0CG42 384 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 ITGB7P26010 798 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 PSME1Q06323 249 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 DOC2BQ14184 412 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 ZNF468Q5VIY5 522 aaPredicted RBP10.15□□□□□ -0.78
TRA2B-201ENST00000259043 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 SIX5Q8N196 739 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 LARGE2Q8N3Y3 721 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.78
TRA2B-201ENST00000259043 BACH1O14867 736 aa10.14□□□□□ -0.79
TRA2B-201ENST00000259043 TPCN2Q8NHX9 752 aa10.14□□□□□ -0.79
TRA2B-201ENST00000259043 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
TRA2B-201ENST00000259043 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
TRA2B-201ENST00000259043 SCHIP1Q9P0W5 487 aaPredicted RBP10.14□□□□□ -0.79
TRA2B-201ENST00000259043 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
TRA2B-201ENST00000259043 SPATA31C1P0DKV0 1188 aa10.13□□□□□ -0.79
TRA2B-201ENST00000259043 GATA4P43694 442 aa10.13□□□□□ -0.79
TRA2B-201ENST00000259043 ZIC5Q96T25 663 aa10.13□□□□□ -0.79
TRA2B-201ENST00000259043 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
TRA2B-201ENST00000259043 PCBP4P57723 403 aaKnown RBP10.12□□□□□ -0.79
TRA2B-201ENST00000259043 SAMD5Q5TGI4 173 aa10.12□□□□□ -0.79
TRA2B-201ENST00000259043 PSMG3-AS1Q96PY0 264 aa10.12□□□□□ -0.79
TRA2B-201ENST00000259043 M0R2N6 131 aa10.11□□□□□ -0.79
TRA2B-201ENST00000259043 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
TRA2B-201ENST00000259043 LAMC2Q13753 1193 aa10.11□□□□□ -0.79
TRA2B-201ENST00000259043 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
TRA2B-201ENST00000259043 RASA1P20936 1047 aa10.1□□□□□ -0.79
TRA2B-201ENST00000259043 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-201ENST00000259043 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
TRA2B-201ENST00000259043 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-201ENST00000259043 CABP1Q9NZU7 370 aa10.1□□□□□ -0.79
TRA2B-201ENST00000259043 ELOA3CA0A087WX78 387 aaPredicted RBP10.09□□□□□ -0.79
TRA2B-201ENST00000259043 SPDYE3A6NKU9 549 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 ELOA3DA6NLF2 546 aaPredicted RBP10.09□□□□□ -0.79
TRA2B-201ENST00000259043 EFSO43281 561 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 PTK7Q13308 1070 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 ELOA3BQ3SY89 546 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 ELOA3Q8NG57 546 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 ZDHHC1Q8WTX9 485 aa10.09□□□□□ -0.79
TRA2B-201ENST00000259043 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
TRA2B-201ENST00000259043 ALAS2P22557 587 aa10.08□□□□□ -0.8
TRA2B-201ENST00000259043 SLC9A9Q8IVB4 645 aa10.08□□□□□ -0.8
TRA2B-201ENST00000259043 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
TRA2B-201ENST00000259043 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
TRA2B-201ENST00000259043 TBCELQ5QJ74 424 aa10.07□□□□□ -0.8
TRA2B-201ENST00000259043 BICDL1Q6ZP65 573 aa10.07□□□□□ -0.8
TRA2B-201ENST00000259043 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
TRA2B-201ENST00000259043 TEAD4Q15561 434 aa10.06□□□□□ -0.8
TRA2B-201ENST00000259043 POTEAQ6S8J7 498 aa10.06□□□□□ -0.8
TRA2B-201ENST00000259043 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L10C9JJH3 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L21D6R901 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 PRRT3Q5FWE3 981 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 LARP1Q6PKG0 1096 aaKnown RBP10.05□□□□□ -0.8
TRA2B-201ENST00000259043 SYT9Q86SS6 491 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 ARXQ96QS3 562 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 MDFIQ99750 246 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 TSPAN10Q9H1Z9 355 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-201ENST00000259043 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
TRA2B-201ENST00000259043 TXLNAP40222 546 aa10.04□□□□□ -0.8
TRA2B-201ENST00000259043 SEC13P55735 322 aa10.04□□□□□ -0.8
TRA2B-201ENST00000259043 SRPK2P78362 688 aaKnown RBP10.04□□□□□ -0.8
TRA2B-201ENST00000259043 DPYDQ12882 1025 aa10.04□□□□□ -0.8
TRA2B-201ENST00000259043 RSPO4Q2I0M5 234 aaPredicted RBP10.04□□□□□ -0.8
TRA2B-201ENST00000259043 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
TRA2B-201ENST00000259043 C21orf2O43822 256 aa10.03□□□□□ -0.8
TRA2B-201ENST00000259043 APBA3O96018 575 aa10.03□□□□□ -0.8
TRA2B-201ENST00000259043 NOS2P35228 1153 aa10.03□□□□□ -0.8
TRA2B-201ENST00000259043 SH3PXD2AQ5TCZ1 1133 aa10.03□□□□□ -0.8
TRA2B-201ENST00000259043 C7orf43Q8WVR3 580 aa10.03□□□□□ -0.8
TRA2B-201ENST00000259043 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.81
TRA2B-201ENST00000259043 EML1O00423 815 aa10.02□□□□□ -0.81
TRA2B-201ENST00000259043 SIN3BO75182 1162 aa10.02□□□□□ -0.81
TRA2B-201ENST00000259043 NKAPLQ5M9Q1 402 aa10.02□□□□□ -0.81
TRA2B-201ENST00000259043 ANKMY2Q8IV38 441 aa10.02□□□□□ -0.81
TRA2B-201ENST00000259043 RFX1P22670 979 aa10.01□□□□□ -0.81
TRA2B-201ENST00000259043 TPSG1Q9NRR2 321 aa10.01□□□□□ -0.81
TRA2B-201ENST00000259043 ARID3CA6NKF2 412 aa10□□□□□ -0.81
TRA2B-201ENST00000259043 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
TRA2B-201ENST00000259043 PSMA6P60900 246 aaKnown RBP10□□□□□ -0.81
TRA2B-201ENST00000259043 KRTAP9-2Q9BYQ4 174 aa10□□□□□ -0.81
TRA2B-201ENST00000259043 PRDM6Q9NQX0 595 aa10□□□□□ -0.81
TRA2B-201ENST00000259043 GPC6Q9Y625 555 aaPredicted RBP10□□□□□ -0.81
TRA2B-201ENST00000259043 SERTM1A2A2V5 107 aa9.99□□□□□ -0.81
TRA2B-201ENST00000259043 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-201ENST00000259043 M0R082 166 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms