RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 NGEFQ8N5V2 710 aa25.11■■□□□ 1.61
TM6SF1-201ENST00000258909 NBPF5PQ86XG9 351 aaPredicted RBP25.1■■□□□ 1.61
TM6SF1-201ENST00000258909 ZNF652Q9Y2D9 606 aa25.1■■□□□ 1.61
TM6SF1-201ENST00000258909 FAM177BA6PVY3 158 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 C21orf2O43822 256 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 HLFQ16534 295 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 CACNA1SQ13698 1873 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 NFKBIEO00221 500 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 TOMM70O94826 608 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 LMNB1P20700 586 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 PDZRN3Q9UPQ7 1066 aa25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 NIP7Q9Y221 180 aaKnown RBP eCLIP25.09■■□□□ 1.61
TM6SF1-201ENST00000258909 KDM2BQ8NHM5 1336 aa25.08■■□□□ 1.61
TM6SF1-201ENST00000258909 RIPK4P57078 832 aa25.08■■□□□ 1.6
TM6SF1-201ENST00000258909 RRP7AQ9Y3A4 280 aaKnown RBP25.08■■□□□ 1.6
TM6SF1-201ENST00000258909 RRAGCQ9HB90 399 aa25.07■■□□□ 1.6
TM6SF1-201ENST00000258909 SLX4Q8IY92 1834 aa25.06■■□□□ 1.6
TM6SF1-201ENST00000258909 MYBBP1AQ9BQG0 1328 aaKnown RBP25.06■■□□□ 1.6
TM6SF1-201ENST00000258909 SRGNP10124 158 aa25.06■■□□□ 1.6
TM6SF1-201ENST00000258909 MYL6BP14649 208 aa25.05■■□□□ 1.6
TM6SF1-201ENST00000258909 CCDC146Q8IYE0 955 aa25.05■■□□□ 1.6
TM6SF1-201ENST00000258909 TSPYL4Q9UJ04 414 aa25.04■■□□□ 1.6
TM6SF1-201ENST00000258909 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 TTLL7Q6ZT98 887 aa25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 C16orf71Q8IYS4 520 aaPredicted RBP25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 MASTLQ96GX5 879 aa25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 TIAM2Q8IVF5 1701 aa25.03■■□□□ 1.6
TM6SF1-201ENST00000258909 NEUROD2Q15784 382 aa25.02■■□□□ 1.6
TM6SF1-201ENST00000258909 PRPF40BQ6NWY9 871 aaKnown RBP25.02■■□□□ 1.6
TM6SF1-201ENST00000258909 TPTE2Q6XPS3 522 aa25.02■■□□□ 1.6
TM6SF1-201ENST00000258909 CNKSR1Q969H4 720 aa25.02■■□□□ 1.6
TM6SF1-201ENST00000258909 FER1L6Q2WGJ9 1857 aa25.02■■□□□ 1.6
TM6SF1-201ENST00000258909 NUP98P52948 1817 aa25.01■■□□□ 1.59
TM6SF1-201ENST00000258909 TNRC6CQ9HCJ0 1690 aaKnown RBP25■■□□□ 1.59
TM6SF1-201ENST00000258909 RGL2O15211 777 aa25■■□□□ 1.59
TM6SF1-201ENST00000258909 ZC3H4Q9UPT8 1303 aaKnown RBP25■■□□□ 1.59
TM6SF1-201ENST00000258909 GTF2E1P29083 439 aaPredicted RBP24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 KIF6Q6ZMV9 814 aa24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 RBM46Q8TBY0 533 aaKnown RBP24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 ZBTB3Q9H5J0 574 aa24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 ARFGEF2Q9Y6D5 1785 aa24.99■■□□□ 1.59
TM6SF1-201ENST00000258909 GLTPD2A6NH11 291 aa24.98■■□□□ 1.59
TM6SF1-201ENST00000258909 EIF2S2P20042 333 aaKnown RBP24.98■■□□□ 1.59
TM6SF1-201ENST00000258909 ERVV-1B6SEH8 477 aa24.97■■□□□ 1.59
TM6SF1-201ENST00000258909 NPR1P16066 1061 aa24.97■■□□□ 1.59
TM6SF1-201ENST00000258909 GPTP24298 496 aa24.97■■□□□ 1.59
TM6SF1-201ENST00000258909 NUTM1Q86Y26 1132 aa24.97■■□□□ 1.59
TM6SF1-201ENST00000258909 TAOK3Q9H2K8 898 aa24.97■■□□□ 1.59
TM6SF1-201ENST00000258909 KLRG2A4D1S0 409 aaPredicted RBP24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 ERFEQ4G0M1 354 aa24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 DICER1Q9UPY3 1922 aaKnown RBP24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 ADAMTS8Q9UP79 889 aa24.96■■□□□ 1.59
TM6SF1-201ENST00000258909 ANXA1P04083 346 aa24.95■■□□□ 1.58
TM6SF1-201ENST00000258909 APLP1P51693 650 aa24.95■■□□□ 1.58
TM6SF1-201ENST00000258909 OLFM4Q6UX06 510 aa24.95■■□□□ 1.58
TM6SF1-201ENST00000258909 C7orf43Q8WVR3 580 aa24.94■■□□□ 1.58
TM6SF1-201ENST00000258909 NECTIN2Q92692 538 aa24.94■■□□□ 1.58
TM6SF1-201ENST00000258909 RUNDC1Q96C34 613 aa24.94■■□□□ 1.58
TM6SF1-201ENST00000258909 ABCC12Q96J65 1359 aa24.94■■□□□ 1.58
TM6SF1-201ENST00000258909 PDIA6Q15084 440 aa24.93■■□□□ 1.58
TM6SF1-201ENST00000258909 PROSER3Q2NL68 480 aa24.93■■□□□ 1.58
TM6SF1-201ENST00000258909 LAS1LQ9Y4W2 734 aaKnown RBP24.93■■□□□ 1.58
TM6SF1-201ENST00000258909 UBN2Q6ZU65 1347 aa24.93■■□□□ 1.58
TM6SF1-201ENST00000258909 LTBP3Q9NS15 1303 aa24.93■■□□□ 1.58
TM6SF1-201ENST00000258909 VEGFAP15692 232 aaPredicted RBP24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 SOGA3Q5TF21 947 aa24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 NYXQ9GZU5 481 aa24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 BABAM1Q9NWV8 329 aa24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 TRIM35Q9UPQ4 493 aa24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 ERBB4Q15303 1308 aa24.92■■□□□ 1.58
TM6SF1-201ENST00000258909 HTRA3P83110 453 aa24.91■■□□□ 1.58
TM6SF1-201ENST00000258909 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
TM6SF1-201ENST00000258909 SUSD4Q5VX71 490 aa24.91■■□□□ 1.58
TM6SF1-201ENST00000258909 LRP10Q7Z4F1 713 aa24.91■■□□□ 1.58
TM6SF1-201ENST00000258909 FSTL1Q12841 308 aa24.9■■□□□ 1.58
TM6SF1-201ENST00000258909 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
TM6SF1-201ENST00000258909 DPY19L2Q6NUT2 758 aa24.9■■□□□ 1.58
TM6SF1-201ENST00000258909 POTECB2RU33 542 aa24.89■■□□□ 1.58
TM6SF1-201ENST00000258909 GIGYF2Q6Y7W6 1299 aaKnown RBP24.89■■□□□ 1.58
TM6SF1-201ENST00000258909 ZNF34Q8IZ26 560 aa24.89■■□□□ 1.58
TM6SF1-201ENST00000258909 WDR90Q96KV7 1748 aa24.88■■□□□ 1.57
TM6SF1-201ENST00000258909 CHL1O00533 1208 aa24.88■■□□□ 1.57
TM6SF1-201ENST00000258909 SMC1BQ8NDV3 1235 aa24.88■■□□□ 1.57
TM6SF1-201ENST00000258909 ALDH1B1P30837 517 aa24.87■■□□□ 1.57
TM6SF1-201ENST00000258909 AIMP1Q12904 312 aaKnown RBP24.87■■□□□ 1.57
TM6SF1-201ENST00000258909 ZNF277Q9NRM2 450 aaPredicted RBP24.87■■□□□ 1.57
TM6SF1-201ENST00000258909 DDNO94850 711 aaPredicted RBP24.86■■□□□ 1.57
TM6SF1-201ENST00000258909 NTSR2O95665 410 aa24.86■■□□□ 1.57
TM6SF1-201ENST00000258909 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
TM6SF1-201ENST00000258909 DNAJC5GQ8N7S2 189 aa24.86■■□□□ 1.57
TM6SF1-201ENST00000258909 FKBP4Q02790 459 aaKnown RBP eCLIP24.85■■□□□ 1.57
TM6SF1-201ENST00000258909 COPS6Q7L5N1 327 aa24.85■■□□□ 1.57
TM6SF1-201ENST00000258909 C3orf67Q6ZVT6 689 aa24.84■■□□□ 1.57
TM6SF1-201ENST00000258909 XAGE3Q8WTP9 111 aa24.84■■□□□ 1.57
TM6SF1-201ENST00000258909 RPGRQ92834 1020 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms