RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DLC1Q96QB1 1528 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
USHBP1-201ENST00000252597 CWF19L2Q2TBE0 894 aaKnown RBP14.28□□□□□ -0.12
USHBP1-201ENST00000252597 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
USHBP1-201ENST00000252597 USP32Q8NFA0 1604 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 UBE2HP62256 183 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 FILIP1Q7Z7B0 1213 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 ERCC4Q92889 916 aaPredicted RBP14.28□□□□□ -0.12
USHBP1-201ENST00000252597 TNMDQ9H2S6 317 aa14.28□□□□□ -0.12
USHBP1-201ENST00000252597 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 H3BQV1 296 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 U2AF2P26368 475 aaKnown RBP eCLIP14.27□□□□□ -0.12
USHBP1-201ENST00000252597 GUCY1B3Q02153 619 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 CUL4AQ13619 759 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 IFFO2Q5TF58 517 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 KIF1BPQ96EK5 621 aa14.27□□□□□ -0.12
USHBP1-201ENST00000252597 FMNL2Q96PY5 1086 aa14.27□□□□□ -0.13
USHBP1-201ENST00000252597 LGR6Q9HBX8 967 aa14.27□□□□□ -0.13
USHBP1-201ENST00000252597 DACT1Q9NYF0 836 aa14.27□□□□□ -0.13
USHBP1-201ENST00000252597 C3P01024 1663 aa14.27□□□□□ -0.13
USHBP1-201ENST00000252597 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 HSPA4P34932 840 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 PDCL2Q8N4E4 241 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 IL17REQ8NFR9 667 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 MYL6BP14649 208 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 LIG1P18858 919 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 NRBP1Q9UHY1 535 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 GOLGA6L6A8MZA4 724 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 RIOK3O14730 519 aaKnown RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 SGSM2O43147 1006 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 TRMT1Q9NXH9 659 aaKnown RBP14.26□□□□□ -0.13
USHBP1-201ENST00000252597 FER1L4A9Z1Z3 1794 aa14.26□□□□□ -0.13
USHBP1-201ENST00000252597 MCM5P33992 734 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 NAA30Q147X3 362 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-201ENST00000252597 CDC37L1Q7L3B6 337 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 FAM184AQ8NB25 1140 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 ANAPC15P60006 121 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 TPD52L1Q16890 204 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-201ENST00000252597 ANO6Q4KMQ2 910 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
USHBP1-201ENST00000252597 KRT85P78386 507 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
USHBP1-201ENST00000252597 ME3Q16798 604 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
USHBP1-201ENST00000252597 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
USHBP1-201ENST00000252597 G3BP1Q13283 466 aaKnown RBP eCLIP14.24□□□□□ -0.13
USHBP1-201ENST00000252597 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 LRRC59Q96AG4 307 aaKnown RBP14.24□□□□□ -0.13
USHBP1-201ENST00000252597 GPATCH3Q96I76 525 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 DNAJC25Q9H1X3 360 aa14.24□□□□□ -0.13
USHBP1-201ENST00000252597 AP5Z1O43299 807 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 ZNF771Q7L3S4 317 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-201ENST00000252597 ZNF330Q9Y3S2 320 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-201ENST00000252597 ATP7BP35670 1465 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 GOLGA6L19H0YKK7 550 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 HSPA2P54652 639 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 SIRT1Q96EB6 747 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
USHBP1-201ENST00000252597 CPS1P31327 1500 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 RAD50Q92878 1312 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 BECN2A8MW95 431 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 CHGBP05060 677 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
USHBP1-201ENST00000252597 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 STK11IPQ8N1F8 1099 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 TECPR2O15040 1411 aa14.22□□□□□ -0.13
USHBP1-201ENST00000252597 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 KCNA6P17658 529 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 MTMR6Q9Y217 621 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 RGS12O14924 1447 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 JAK2O60674 1132 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 ATP2B3Q16720 1220 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 CCDC94Q9BW85 323 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.13
USHBP1-201ENST00000252597 TPCN1Q9ULQ1 816 aa14.21□□□□□ -0.13
USHBP1-201ENST00000252597 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms