RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PLA2G4AP47712 749 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
PTPN12-201ENST00000248594 NEO1Q92859 1461 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 FYB1O15117 783 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 TEX2Q8IWB9 1127 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 ZSWIM4Q9H7M6 989 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 SLC20A2Q08357 652 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 JAKMIP1Q96N16 626 aaKnown RBP21.56■■□□□ 1.04
PTPN12-201ENST00000248594 DNAI1Q9UI46 699 aa21.56■■□□□ 1.04
PTPN12-201ENST00000248594 ARGLU1Q9NWB6 273 aaPredicted RBP21.55■■□□□ 1.04
PTPN12-201ENST00000248594 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
PTPN12-201ENST00000248594 MTMR6Q9Y217 621 aa21.55■■□□□ 1.04
PTPN12-201ENST00000248594 FHOD1Q9Y613 1164 aa21.55■■□□□ 1.04
PTPN12-201ENST00000248594 MYCNP04198 464 aaPredicted RBP21.55■■□□□ 1.04
PTPN12-201ENST00000248594 PRR29P0C7W0 189 aa21.55■■□□□ 1.04
PTPN12-201ENST00000248594 PPRC1Q5VV67 1664 aaKnown RBP21.54■■□□□ 1.04
PTPN12-201ENST00000248594 MSH6P52701 1360 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 HDAC5Q9UQL6 1122 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 NR1I2O75469 434 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 SMC2O95347 1197 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 CDC37L1Q7L3B6 337 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 DDX11Q96FC9 970 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 NFE2L2Q16236 605 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 TXLNBQ8N3L3 684 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 LRRCC1Q9C099 1032 aa21.54■■□□□ 1.04
PTPN12-201ENST00000248594 KIF1BPQ96EK5 621 aa21.53■■□□□ 1.04
PTPN12-201ENST00000248594 TMEM87AQ8NBN3 555 aa21.52■■□□□ 1.04
PTPN12-201ENST00000248594 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
PTPN12-201ENST00000248594 PLEKHA4Q9H4M7 779 aa21.51■■□□□ 1.03
PTPN12-201ENST00000248594 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
PTPN12-201ENST00000248594 CASQ1P31415 396 aa21.51■■□□□ 1.03
PTPN12-201ENST00000248594 PRPF40BQ6NWY9 871 aaKnown RBP21.51■■□□□ 1.03
PTPN12-201ENST00000248594 GOLGA6L1Q8N7Z2 621 aa21.51■■□□□ 1.03
PTPN12-201ENST00000248594 MYOM1P52179 1685 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 RGS12O14924 1447 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 CARD6Q9BX69 1037 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 CWC15Q9P013 229 aaKnown RBP21.5■■□□□ 1.03
PTPN12-201ENST00000248594 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 C11orf57Q6ZUT1 292 aaPredicted RBP21.5■■□□□ 1.03
PTPN12-201ENST00000248594 PLA2G4DQ86XP0 818 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 ZFYVE16Q7Z3T8 1539 aa21.5■■□□□ 1.03
PTPN12-201ENST00000248594 FCHSD2O94868 740 aa21.49■■□□□ 1.03
PTPN12-201ENST00000248594 MCM10Q7L590 875 aa21.49■■□□□ 1.03
PTPN12-201ENST00000248594 ANAPC15P60006 121 aa21.49■■□□□ 1.03
PTPN12-201ENST00000248594 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
PTPN12-201ENST00000248594 TTLL5Q6EMB2 1281 aa21.49■■□□□ 1.03
PTPN12-201ENST00000248594 RRP15Q9Y3B9 282 aaKnown RBP21.49■■□□□ 1.03
PTPN12-201ENST00000248594 CLTCL1P53675 1640 aa21.49■■□□□ 1.03
PTPN12-201ENST00000248594 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
PTPN12-201ENST00000248594 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 LAMC1P11047 1609 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 PHACTR2O75167 634 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 TMC6Q7Z403 805 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 NME9Q86XW9 330 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 C14orf93Q9H972 538 aaKnown RBP21.48■■□□□ 1.03
PTPN12-201ENST00000248594 SHPRHQ149N8 1683 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 MADDQ8WXG6 1647 aa21.48■■□□□ 1.03
PTPN12-201ENST00000248594 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
PTPN12-201ENST00000248594 IDI1Q13907 227 aa21.47■■□□□ 1.03
PTPN12-201ENST00000248594 SMC1AQ14683 1233 aaKnown RBP21.47■■□□□ 1.03
PTPN12-201ENST00000248594 ZRSR1Q15695 479 aaKnown RBP21.47■■□□□ 1.03
PTPN12-201ENST00000248594 G2E3Q7L622 706 aa21.47■■□□□ 1.03
PTPN12-201ENST00000248594 MCM6Q14566 821 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■□□□ 12.2
PTPN12-201ENST00000248594 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 ADCK5Q3MIX3 580 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 ICE2Q659A1 982 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 ISM2Q6H9L7 571 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 AOPEPQ8N6M6 819 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 AK7Q96M32 723 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 EFCC1Q9HA90 598 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 TERF2IPQ9NYB0 399 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
PTPN12-201ENST00000248594 LEKR1Q6ZMV7 388 aa21.45■■□□□ 1.02
PTPN12-201ENST00000248594 PTPRCP08575 1304 aa21.45■■□□□ 1.02
PTPN12-201ENST00000248594 ERBB3P21860 1342 aa21.45■■□□□ 1.02
PTPN12-201ENST00000248594 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 BIN1O00499 593 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 IBSPP21815 317 aaPredicted RBP21.44■■□□□ 1.02
PTPN12-201ENST00000248594 HSPA4P34932 840 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
PTPN12-201ENST00000248594 NYAP1Q6ZVC0 841 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 RICTORQ6R327 1708 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 GOLGA8FQ08AF8 430 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 GOLGA8DPQ0D2H9 430 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 VPS18Q9P253 973 aa21.44■■□□□ 1.02
PTPN12-201ENST00000248594 EVCP57679 992 aa21.43■■□□□ 1.02
PTPN12-201ENST00000248594 TTC31Q49AM3 519 aaPredicted RBP21.43■■□□□ 1.02
PTPN12-201ENST00000248594 TDRD7Q8NHU6 1098 aaKnown RBP21.43■■□□□ 1.02
PTPN12-201ENST00000248594 MED14O60244 1454 aa21.43■■□□□ 1.02
PTPN12-201ENST00000248594 CEP152O94986 1710 aa21.43■■□□□ 1.02
PTPN12-201ENST00000248594 NOP2P46087 812 aaKnown RBP21.43■■□□□ 1.02
PTPN12-201ENST00000248594 JRKLQ9Y4A0 524 aa21.43■■□□□ 1.02
PTPN12-201ENST00000248594 SURF6O75683 361 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms