RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ZNF219Q9P2Y4 722 aaPredicted RBP21.3■■□□□ 1
CLPP-201ENST00000245816 RRP7AQ9Y3A4 280 aaKnown RBP21.3■■□□□ 1
CLPP-201ENST00000245816 SRGNP10124 158 aa21.29■■□□□ 1
CLPP-201ENST00000245816 RIPK4P57078 832 aa21.29■■□□□ 1
CLPP-201ENST00000245816 PDIA6Q15084 440 aa21.29■■□□□ 1
CLPP-201ENST00000245816 CCDC146Q8IYE0 955 aa21.29■■□□□ 1
CLPP-201ENST00000245816 CNBD1Q8NA66 436 aa21.29■■□□□ 1
CLPP-201ENST00000245816 KLRG2A4D1S0 409 aaPredicted RBP21.28■■□□□ 1
CLPP-201ENST00000245816 C21orf2O43822 256 aa21.28■■□□□ 1
CLPP-201ENST00000245816 HSPA6P17066 643 aa21.28■■□□□ 1
CLPP-201ENST00000245816 PDE6BP35913 854 aa21.28■■□□□ 1
CLPP-201ENST00000245816 NGEFQ8N5V2 710 aa21.28■■□□□ 1
CLPP-201ENST00000245816 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
CLPP-201ENST00000245816 CCDC88AQ3V6T2 1871 aa21.28■■□□□ 1
CLPP-201ENST00000245816 FER1L6Q2WGJ9 1857 aa21.27■■□□□ 1
CLPP-201ENST00000245816 C7orf43Q8WVR3 580 aa21.27■■□□□ 1
CLPP-201ENST00000245816 TRIM35Q9UPQ4 493 aa21.27■■□□□ 1
CLPP-201ENST00000245816 NIP7Q9Y221 180 aaKnown RBP eCLIP21.27■■□□□ 1
CLPP-201ENST00000245816 MAPK8IP3Q9UPT6 1336 aa21.27■□□□□ 0.99
CLPP-201ENST00000245816 TNRC6CQ9HCJ0 1690 aaKnown RBP21.25■□□□□ 0.99
CLPP-201ENST00000245816 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 MYL6BP14649 208 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 LMNB1P20700 586 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 PROSER3Q2NL68 480 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 OLFM4Q6UX06 510 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 SLC51AQ86UW1 340 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 NBPF5PQ86XG9 351 aaPredicted RBP21.25■□□□□ 0.99
CLPP-201ENST00000245816 RRAGCQ9HB90 399 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 NUP98P52948 1817 aa21.25■□□□□ 0.99
CLPP-201ENST00000245816 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 POTECB2RU33 542 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 RGL2O15211 777 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 TOMM70O94826 608 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
CLPP-201ENST00000245816 STYK1Q6J9G0 422 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 UBN2Q6ZU65 1347 aa21.24■□□□□ 0.99
CLPP-201ENST00000245816 ABCC12Q96J65 1359 aa21.23■□□□□ 0.99
CLPP-201ENST00000245816 ANXA1P04083 346 aa21.23■□□□□ 0.99
CLPP-201ENST00000245816 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
CLPP-201ENST00000245816 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
CLPP-201ENST00000245816 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
CLPP-201ENST00000245816 MAP3K15Q6ZN16 1313 aa21.23■□□□□ 0.99
CLPP-201ENST00000245816 ARFGEF2Q9Y6D5 1785 aa21.23■□□□□ 0.99
CLPP-201ENST00000245816 ST5P78524 1137 aa21.22■□□□□ 0.99
CLPP-201ENST00000245816 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
CLPP-201ENST00000245816 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
CLPP-201ENST00000245816 TIAM2Q8IVF5 1701 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 ERVV-1B6SEH8 477 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 ZBTB3Q9H5J0 574 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
CLPP-201ENST00000245816 CHL1O00533 1208 aa21.2■□□□□ 0.98
CLPP-201ENST00000245816 ANP32CO43423 234 aa21.2■□□□□ 0.98
CLPP-201ENST00000245816 ZNF34Q8IZ26 560 aa21.2■□□□□ 0.98
CLPP-201ENST00000245816 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
CLPP-201ENST00000245816 GLTPD2A6NH11 291 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 LMOD3Q0VAK6 560 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 ERFEQ4G0M1 354 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 CCDC184Q52MB2 194 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 SUSD4Q5VX71 490 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 C3orf67Q6ZVT6 689 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 SNED1Q8TER0 1413 aa21.19■□□□□ 0.98
CLPP-201ENST00000245816 EIF2S2P20042 333 aaKnown RBP21.18■□□□□ 0.98
CLPP-201ENST00000245816 GPTP24298 496 aa21.18■□□□□ 0.98
CLPP-201ENST00000245816 DNAJC5GQ8N7S2 189 aa21.18■□□□□ 0.98
CLPP-201ENST00000245816 LTBP3Q9NS15 1303 aa21.18■□□□□ 0.98
CLPP-201ENST00000245816 DICER1Q9UPY3 1922 aaKnown RBP21.17■□□□□ 0.98
CLPP-201ENST00000245816 NPR1P16066 1061 aa21.17■□□□□ 0.98
CLPP-201ENST00000245816 HTRA3P83110 453 aa21.17■□□□□ 0.98
CLPP-201ENST00000245816 RBM46Q8TBY0 533 aaKnown RBP21.17■□□□□ 0.98
CLPP-201ENST00000245816 NECTIN2Q92692 538 aa21.17■□□□□ 0.98
CLPP-201ENST00000245816 BABAM1Q9NWV8 329 aa21.17■□□□□ 0.98
CLPP-201ENST00000245816 KDM2BQ8NHM5 1336 aa21.17■□□□□ 0.98
CLPP-201ENST00000245816 ZC3H4Q9UPT8 1303 aaKnown RBP21.17■□□□□ 0.98
CLPP-201ENST00000245816 NTSR2O95665 410 aa21.16■□□□□ 0.98
CLPP-201ENST00000245816 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
CLPP-201ENST00000245816 GIGYF2Q6Y7W6 1299 aaKnown RBP21.16■□□□□ 0.98
CLPP-201ENST00000245816 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
CLPP-201ENST00000245816 NPHP1O15259 732 aa21.15■□□□□ 0.98
CLPP-201ENST00000245816 TAOK3Q9H2K8 898 aa21.13■□□□□ 0.97
CLPP-201ENST00000245816 WDR90Q96KV7 1748 aa21.12■□□□□ 0.97
CLPP-201ENST00000245816 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
CLPP-201ENST00000245816 SYNE4Q8N205 404 aa21.12■□□□□ 0.97
CLPP-201ENST00000245816 COL4A5P29400 1685 aa21.12■□□□□ 0.97
CLPP-201ENST00000245816 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
CLPP-201ENST00000245816 COPS6Q7L5N1 327 aa21.11■□□□□ 0.97
CLPP-201ENST00000245816 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
CLPP-201ENST00000245816 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
CLPP-201ENST00000245816 DDNO94850 711 aaPredicted RBP21.1■□□□□ 0.97
CLPP-201ENST00000245816 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
CLPP-201ENST00000245816 ZNF277Q9NRM2 450 aaPredicted RBP21.1■□□□□ 0.97
CLPP-201ENST00000245816 LAS1LQ9Y4W2 734 aaKnown RBP21.1■□□□□ 0.97
CLPP-201ENST00000245816 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
CLPP-201ENST00000245816 APAF1O14727 1248 aa21.09■□□□□ 0.97
CLPP-201ENST00000245816 POTEIP0CG38 1075 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms