RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 CEMIPQ8WUJ3 1361 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 RNMTO43148 476 aaKnown RBP6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 EIF2S2P20042 333 aaKnown RBP6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 CCDC30Q5VVM6 783 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 STRN4Q9NRL3 753 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 BABAM1Q9NWV8 329 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 CPDO75976 1380 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 ZBTB7BO15156 539 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 EVA1CP58658 441 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 HDGFL1Q5TGJ6 251 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 SLC4A10Q6U841 1118 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 ABCC4O15439 1325 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 PTPRCP08575 1304 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 FKBP5Q13451 457 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 PHOX2BQ99453 314 aa6.75□□□□□ -1.33
TRAPPC13-201ENST00000231526 NCAPD2Q15021 1401 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 KCNQ3O43525 872 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 ONECUT3O60422 494 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 PDE4AP27815 886 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 G2E3Q7L622 706 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 KAT6BQ8WYB5 2073 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 F6X3S4 739 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 FLIIQ13045 1269 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 IRF5Q13568 498 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 WDR17Q8IZU2 1322 aa6.74□□□□□ -1.33
TRAPPC13-201ENST00000231526 TTLL12Q14166 644 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 COL18A1P39060 1754 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 MEGF6O75095 1541 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 PHKG2P15735 406 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 ANAPC15P60006 121 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 SETQ01105 290 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 HDAC1Q13547 482 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 BACH2Q9BYV9 841 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 SCUBE2Q9NQ36 999 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 PDZRN3Q9UPQ7 1066 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 LRRC37A3O60309 1634 aa6.73□□□□□ -1.33
TRAPPC13-201ENST00000231526 CYP27B1O15528 508 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 INTS3Q68E01 1043 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 SOS1Q07889 1333 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 CAMTA1Q9Y6Y1 1673 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 SMARCA5O60264 1052 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 PIP4K2BP78356 416 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 SLC39A6Q13433 755 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 FAM43BQ6ZT52 329 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 FBXW7Q969H0 707 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 KIF12Q96FN5 646 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 BTG4Q9NY30 223 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 CACNA1FO60840 1977 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 CRYBG1Q9Y4K1 1723 aa6.72□□□□□ -1.33
TRAPPC13-201ENST00000231526 ANXA1P04083 346 aa6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 DCAF5Q96JK2 942 aa6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 PHAXQ9H814 394 aaKnown RBP6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 SLC52A2Q9HAB3 445 aa6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 LMO7Q8WWI1 1683 aa6.71□□□□□ -1.33
TRAPPC13-201ENST00000231526 COL5A2P05997 1499 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 LOC102724159A0A0B4J2E5 919 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 GIGYF1O75420 1035 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 HOXB7P09629 217 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 IL2RBP14784 551 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 PWP2Q15269 919 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 PPP1R15BQ5SWA1 713 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 ZNF790Q6PG37 636 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 RETREG2Q8NC44 543 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 ZCRB1Q8TBF4 217 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 MEIS3Q99687 375 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 CHPF2Q9P2E5 772 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 NHSL1Q5SYE7 1610 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 RGS12O14924 1447 aa6.71□□□□□ -1.34
TRAPPC13-201ENST00000231526 ABCC6O95255 1503 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 MAFGO15525 162 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 TOM1O60784 492 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 PTMSP20962 102 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 ANP32AP39687 249 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 CCT4P50991 539 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 CABP4P57796 275 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 SMC5Q8IY18 1101 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 TTC5Q8N0Z6 440 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 PROCA1Q8NCQ7 364 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 FAM208AQ9UK61 1670 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 PRAMEF22A3QJZ6 481 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 ANKRD45Q5TZF3 282 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 LNPKQ9C0E8 428 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 DBF4Q9UBU7 674 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 PCDH11XQ9BZA7 1347 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 PCDH11YQ9BZA8 1340 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
TRAPPC13-201ENST00000231526 OVOS2A0A0G2JMS6 1433 aa6.69□□□□□ -1.34
TRAPPC13-201ENST00000231526 KDM6AO15550 1401 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms