RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 EVI5LQ96CN4 794 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 GOLGA6L10A0A0M3HER8 536 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 PAFAH1B1P43034 410 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 BAG4O95429 457 aaKnown RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 PTPRCP08575 1304 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 IQGAP2Q13576 1575 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 TRIM27P14373 513 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 MYZAPP0CAP1 466 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 TRMT1Q9NXH9 659 aaKnown RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 TBC1D9Q6ZT07 1266 aa13.35□□□□□ -0.27
LAMA4-201ENST00000230538 DDX19AQ9NUU7 478 aaKnown RBP13.35□□□□□ -0.27
LAMA4-201ENST00000230538 MTIF2P46199 727 aaKnown RBP13.34□□□□□ -0.27
LAMA4-201ENST00000230538 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
LAMA4-201ENST00000230538 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
LAMA4-201ENST00000230538 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
LAMA4-201ENST00000230538 TNNT1P13805 278 aa13.34□□□□□ -0.27
LAMA4-201ENST00000230538 STX1AQ16623 288 aa13.34□□□□□ -0.27
LAMA4-201ENST00000230538 IGHDP01880 384 aa13.33□□□□□ -0.27
LAMA4-201ENST00000230538 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.27
LAMA4-201ENST00000230538 ABCC5O15440 1437 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 LIG1P18858 919 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 TSHZ3Q63HK5 1081 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
LAMA4-201ENST00000230538 AMPD3Q01432 767 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 TMC6Q7Z403 805 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 HOOK3Q86VS8 718 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 MAP3K2Q9Y2U5 619 aa13.33□□□□□ -0.28
LAMA4-201ENST00000230538 GOLIM4O00461 696 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 NEMFO60524 1076 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 GSDMDP57764 484 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
LAMA4-201ENST00000230538 BIN1O00499 593 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 STAMBPO95630 424 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 CTNNA2P26232 953 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 CETN1Q12798 172 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 CCDC40Q4G0X9 1142 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 GPTP24298 496 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 FLIIQ13045 1269 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
LAMA4-201ENST00000230538 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
LAMA4-201ENST00000230538 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
LAMA4-201ENST00000230538 KIF5BP33176 963 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 STX6O43752 255 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 ADCY5O95622 1261 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
LAMA4-201ENST00000230538 SMC1AQ14683 1233 aaKnown RBP13.31□□□□□ -0.28
LAMA4-201ENST00000230538 TAOK3Q9H2K8 898 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 TFIP11Q9UBB9 837 aaKnown RBP13.31□□□□□ -0.28
LAMA4-201ENST00000230538 UBE4AQ14139 1066 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
LAMA4-201ENST00000230538 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 DISP3Q9P2K9 1392 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 CUL7Q14999 1698 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
LAMA4-201ENST00000230538 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
LAMA4-201ENST00000230538 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 ISM2Q6H9L7 571 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 GIMAP7Q8NHV1 300 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 TCERG1LQ5VWI1 586 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 VAT1LQ9HCJ6 419 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 RAB11FIP4Q86YS3 637 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 PDE4BQ07343 736 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-201ENST00000230538 MICALCLQ6ZW33 695 aa13.3□□□□□ -0.28
LAMA4-201ENST00000230538 NF2P35240 595 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 MFSD6Q6ZSS7 791 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms