RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 FAM200AQ8TCP9 573 aa18.47■□□□□ 0.55
VTN-201ENST00000226218 ZSCAN31Q96LW9 406 aaPredicted RBP18.47■□□□□ 0.55
VTN-201ENST00000226218 EYA1Q99502 592 aa18.47■□□□□ 0.55
VTN-201ENST00000226218 ZSWIM6Q9HCJ5 1215 aa18.47■□□□□ 0.55
VTN-201ENST00000226218 GOLGA6L6A8MZA4 724 aa18.47■□□□□ 0.55
VTN-201ENST00000226218 SH2B1Q9NRF2 756 aaPredicted RBP18.47■□□□□ 0.55
VTN-201ENST00000226218 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 ELP1O95163 1332 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 CCDC171Q6TFL3 1326 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 PTPRUQ92729 1446 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 ADCK5Q3MIX3 580 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
VTN-201ENST00000226218 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 SPC24Q8NBT2 197 aa18.46■□□□□ 0.55
VTN-201ENST00000226218 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
VTN-201ENST00000226218 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
VTN-201ENST00000226218 CHAF1AQ13111 956 aaPredicted RBP18.45■□□□□ 0.54
VTN-201ENST00000226218 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
VTN-201ENST00000226218 PIK3C2AO00443 1686 aa18.45■□□□□ 0.54
VTN-201ENST00000226218 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
VTN-201ENST00000226218 PTH1RQ03431 593 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 PTGS1P23219 599 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 SYCP1Q15431 976 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 ME3Q16798 604 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
VTN-201ENST00000226218 KIF20AO95235 890 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 RBM43Q6ZSC3 357 aaKnown RBP18.43■□□□□ 0.54
VTN-201ENST00000226218 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 TYRO3Q06418 890 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 MAP3K11Q16584 847 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
VTN-201ENST00000226218 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
VTN-201ENST00000226218 PHAXQ9H814 394 aaKnown RBP18.43■□□□□ 0.54
VTN-201ENST00000226218 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
VTN-201ENST00000226218 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
VTN-201ENST00000226218 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
VTN-201ENST00000226218 LIG1P18858 919 aa18.42■□□□□ 0.54
VTN-201ENST00000226218 NCBP1Q09161 790 aaKnown RBP18.42■□□□□ 0.54
VTN-201ENST00000226218 NUP62CLQ9H1M0 184 aa18.42■□□□□ 0.54
VTN-201ENST00000226218 UBR1Q8IWV7 1749 aa18.42■□□□□ 0.54
VTN-201ENST00000226218 PDIA4P13667 645 aaKnown RBP18.41■□□□□ 0.54
VTN-201ENST00000226218 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
VTN-201ENST00000226218 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
VTN-201ENST00000226218 USP54Q70EL1 1684 aa18.41■□□□□ 0.54
VTN-201ENST00000226218 DTNBO60941 627 aa18.41■□□□□ 0.54
VTN-201ENST00000226218 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
VTN-201ENST00000226218 KRT85P78386 507 aa18.41■□□□□ 0.54
VTN-201ENST00000226218 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
VTN-201ENST00000226218 PLA2G4DQ86XP0 818 aa18.41■□□□□ 0.54
VTN-201ENST00000226218 VPS37CA5D8V6 355 aaPredicted RBP18.4■□□□□ 0.54
VTN-201ENST00000226218 SOX12O15370 315 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 TAF7Q15545 349 aaPredicted RBP18.4■□□□□ 0.54
VTN-201ENST00000226218 RUFY2Q8WXA3 655 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 FEZ1Q99689 392 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 SPDYE4A6NLX3 237 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
VTN-201ENST00000226218 LUZP1Q86V48 1076 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
VTN-201ENST00000226218 CBX8Q9HC52 389 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
VTN-201ENST00000226218 DIP2BQ9P265 1576 aa18.39■□□□□ 0.54
VTN-201ENST00000226218 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
VTN-201ENST00000226218 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
VTN-201ENST00000226218 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
VTN-201ENST00000226218 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
VTN-201ENST00000226218 SMTNL1A8MU46 457 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 MTX1Q13505 466 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 ZNF75DP51815 510 aa18.38■□□□□ 0.53
VTN-201ENST00000226218 LRMPQ12912 555 aa18.37■□□□□ 0.53
VTN-201ENST00000226218 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
VTN-201ENST00000226218 LARP1BQ659C4 914 aaKnown RBP18.37■□□□□ 0.53
VTN-201ENST00000226218 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
VTN-201ENST00000226218 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
VTN-201ENST00000226218 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
VTN-201ENST00000226218 CAMK4Q16566 473 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
VTN-201ENST00000226218 CLSTN2Q9H4D0 955 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
VTN-201ENST00000226218 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 OGFRQ9NZT2 677 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 NRBP1Q9UHY1 535 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 MYH15Q9Y2K3 1946 aa18.36■□□□□ 0.53
VTN-201ENST00000226218 NPHP4O75161 1426 aaPredicted RBP18.35■□□□□ 0.53
VTN-201ENST00000226218 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms