RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CCDC24Q8N4L8 307 aa23.67■■□□□ 1.38
PFN1-201ENST00000225655 NMRK2Q9NPI5 230 aa23.67■■□□□ 1.38
PFN1-201ENST00000225655 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
PFN1-201ENST00000225655 HSPA6P17066 643 aa23.66■■□□□ 1.38
PFN1-201ENST00000225655 RASSF7Q02833 373 aa23.66■■□□□ 1.38
PFN1-201ENST00000225655 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.38
PFN1-201ENST00000225655 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
PFN1-201ENST00000225655 LMNB1P20700 586 aa23.65■■□□□ 1.38
PFN1-201ENST00000225655 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
PFN1-201ENST00000225655 TOMM70O94826 608 aa23.64■■□□□ 1.37
PFN1-201ENST00000225655 NBPF5PQ86XG9 351 aaPredicted RBP23.64■■□□□ 1.37
PFN1-201ENST00000225655 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 SRGNP10124 158 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 RIPK4P57078 832 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 CCDC88AQ3V6T2 1871 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 STYK1Q6J9G0 422 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
PFN1-201ENST00000225655 NIP7Q9Y221 180 aaKnown RBP eCLIP23.63■■□□□ 1.37
PFN1-201ENST00000225655 TNRC6CQ9HCJ0 1690 aaKnown RBP23.63■■□□□ 1.37
PFN1-201ENST00000225655 NFKBIEO00221 500 aa23.62■■□□□ 1.37
PFN1-201ENST00000225655 PRELPP51888 382 aa23.62■■□□□ 1.37
PFN1-201ENST00000225655 CNKSR1Q969H4 720 aa23.62■■□□□ 1.37
PFN1-201ENST00000225655 FER1L6Q2WGJ9 1857 aa23.62■■□□□ 1.37
PFN1-201ENST00000225655 TPTE2Q6XPS3 522 aa23.61■■□□□ 1.37
PFN1-201ENST00000225655 TIAM2Q8IVF5 1701 aa23.61■■□□□ 1.37
PFN1-201ENST00000225655 CACNA1SQ13698 1873 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 C21orf2O43822 256 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
PFN1-201ENST00000225655 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 HLFQ16534 295 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 MASTLQ96GX5 879 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 SLX4Q8IY92 1834 aa23.6■■□□□ 1.37
PFN1-201ENST00000225655 NUP98P52948 1817 aa23.59■■□□□ 1.37
PFN1-201ENST00000225655 ERVV-1B6SEH8 477 aa23.59■■□□□ 1.37
PFN1-201ENST00000225655 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
PFN1-201ENST00000225655 TSPYL4Q9UJ04 414 aa23.59■■□□□ 1.37
PFN1-201ENST00000225655 ERBB4Q15303 1308 aa23.59■■□□□ 1.37
PFN1-201ENST00000225655 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.37
PFN1-201ENST00000225655 PRPF40BQ6NWY9 871 aaKnown RBP23.58■■□□□ 1.37
PFN1-201ENST00000225655 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
PFN1-201ENST00000225655 DICER1Q9UPY3 1922 aaKnown RBP23.57■■□□□ 1.36
PFN1-201ENST00000225655 C16orf71Q8IYS4 520 aaPredicted RBP23.57■■□□□ 1.36
PFN1-201ENST00000225655 NGEFQ8N5V2 710 aa23.57■■□□□ 1.36
PFN1-201ENST00000225655 RBM46Q8TBY0 533 aaKnown RBP23.57■■□□□ 1.36
PFN1-201ENST00000225655 ZNF219Q9P2Y4 722 aaPredicted RBP23.57■■□□□ 1.36
PFN1-201ENST00000225655 MAP3K15Q6ZN16 1313 aa23.57■■□□□ 1.36
PFN1-201ENST00000225655 LTBP3Q9NS15 1303 aa23.57■■□□□ 1.36
PFN1-201ENST00000225655 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
PFN1-201ENST00000225655 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
PFN1-201ENST00000225655 KIF6Q6ZMV9 814 aa23.56■■□□□ 1.36
PFN1-201ENST00000225655 RRAGCQ9HB90 399 aa23.56■■□□□ 1.36
PFN1-201ENST00000225655 GLTPD2A6NH11 291 aa23.55■■□□□ 1.36
PFN1-201ENST00000225655 MYL6BP14649 208 aa23.55■■□□□ 1.36
PFN1-201ENST00000225655 NPR1P16066 1061 aa23.55■■□□□ 1.36
PFN1-201ENST00000225655 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
PFN1-201ENST00000225655 TTLL7Q6ZT98 887 aa23.54■■□□□ 1.36
PFN1-201ENST00000225655 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
PFN1-201ENST00000225655 FAM177BA6PVY3 158 aa23.53■■□□□ 1.36
PFN1-201ENST00000225655 APLP1P51693 650 aa23.53■■□□□ 1.36
PFN1-201ENST00000225655 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
PFN1-201ENST00000225655 NYXQ9GZU5 481 aa23.53■■□□□ 1.36
PFN1-201ENST00000225655 TAOK3Q9H2K8 898 aa23.53■■□□□ 1.36
PFN1-201ENST00000225655 GTF2E1P29083 439 aaPredicted RBP23.52■■□□□ 1.36
PFN1-201ENST00000225655 C7orf43Q8WVR3 580 aa23.52■■□□□ 1.36
PFN1-201ENST00000225655 FSTL1Q12841 308 aa23.51■■□□□ 1.35
PFN1-201ENST00000225655 ERFEQ4G0M1 354 aa23.51■■□□□ 1.35
PFN1-201ENST00000225655 ZBTB3Q9H5J0 574 aa23.51■■□□□ 1.35
PFN1-201ENST00000225655 IBTKQ9P2D0 1353 aaPredicted RBP23.51■■□□□ 1.35
PFN1-201ENST00000225655 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
PFN1-201ENST00000225655 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
PFN1-201ENST00000225655 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
PFN1-201ENST00000225655 EIF2S2P20042 333 aaKnown RBP23.49■■□□□ 1.35
PFN1-201ENST00000225655 PDIA6Q15084 440 aa23.49■■□□□ 1.35
PFN1-201ENST00000225655 MIER1Q8N108 512 aa23.49■■□□□ 1.35
PFN1-201ENST00000225655 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
PFN1-201ENST00000225655 RIC1Q4ADV7 1423 aa23.49■■□□□ 1.35
PFN1-201ENST00000225655 WDR90Q96KV7 1748 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 CHL1O00533 1208 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 VEGFAP15692 232 aaPredicted RBP23.48■■□□□ 1.35
PFN1-201ENST00000225655 CRY2Q49AN0 593 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 CCDC184Q52MB2 194 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 CCDC93Q567U6 631 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 DPY19L2Q6NUT2 758 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
PFN1-201ENST00000225655 ZNF34Q8IZ26 560 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 UBN2Q6ZU65 1347 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
PFN1-201ENST00000225655 GPTP24298 496 aa23.47■■□□□ 1.35
PFN1-201ENST00000225655 ALDH1B1P30837 517 aa23.47■■□□□ 1.35
PFN1-201ENST00000225655 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
PFN1-201ENST00000225655 PROSER3Q2NL68 480 aa23.45■■□□□ 1.34
PFN1-201ENST00000225655 SUSD4Q5VX71 490 aa23.45■■□□□ 1.34
PFN1-201ENST00000225655 SMC1BQ8NDV3 1235 aa23.45■■□□□ 1.34
PFN1-201ENST00000225655 RTKN2Q8IZC4 609 aa23.44■■□□□ 1.34
PFN1-201ENST00000225655 NTSR2O95665 410 aa23.43■■□□□ 1.34
PFN1-201ENST00000225655 FKBP4Q02790 459 aaKnown RBP eCLIP23.43■■□□□ 1.34
PFN1-201ENST00000225655 PARP10Q53GL7 1025 aa23.43■■□□□ 1.34
PFN1-201ENST00000225655 PPP1R42Q7Z4L9 355 aa23.43■■□□□ 1.34
PFN1-201ENST00000225655 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
PFN1-201ENST00000225655 POTECB2RU33 542 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms