RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ATP8B2P98198 1209 aa30.45■■■□□ 2.47
RUNDC3A-201ENST00000225441 FLIIQ13045 1269 aa30.45■■■□□ 2.47
RUNDC3A-201ENST00000225441 EPB41L2O43491 1005 aaKnown RBP30.45■■■□□ 2.46
RUNDC3A-201ENST00000225441 TMOD3Q9NYL9 352 aa30.45■■■□□ 2.46
RUNDC3A-201ENST00000225441 TRPC5Q9UL62 973 aaPredicted RBP30.45■■■□□ 2.46
RUNDC3A-201ENST00000225441 AOX1Q06278 1338 aa30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 SALL3Q9BXA9 1300 aa30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 SMARCA5O60264 1052 aaPredicted RBP30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 SLC4A10Q6U841 1118 aa30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 MARCH10Q8NA82 808 aaPredicted RBP30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 GJD4Q96KN9 370 aaPredicted RBP30.44■■■□□ 2.46
RUNDC3A-201ENST00000225441 THSD7AQ9UPZ6 1657 aa30.43■■■□□ 2.46
RUNDC3A-201ENST00000225441 NECTIN2Q92692 538 aa30.43■■■□□ 2.46
RUNDC3A-201ENST00000225441 ZNF496Q96IT1 587 aaPredicted RBP30.43■■■□□ 2.46
RUNDC3A-201ENST00000225441 MCM2P49736 904 aa30.43■■■□□ 2.46
RUNDC3A-201ENST00000225441 LRRCC1Q9C099 1032 aa30.43■■■□□ 2.46
RUNDC3A-201ENST00000225441 FMNL2Q96PY5 1086 aa30.42■■■□□ 2.46
RUNDC3A-201ENST00000225441 CYP2E1P05181 493 aaPredicted RBP30.41■■■□□ 2.46
RUNDC3A-201ENST00000225441 EIF2S2P20042 333 aaKnown RBP30.41■■■□□ 2.46
RUNDC3A-201ENST00000225441 STAP2Q9UGK3 403 aa30.41■■■□□ 2.46
RUNDC3A-201ENST00000225441 ITGB4P16144 1822 aa30.41■■■□□ 2.46
RUNDC3A-201ENST00000225441 F6X3S4 739 aa30.4■■■□□ 2.46
RUNDC3A-201ENST00000225441 DOT1LQ8TEK3 1739 aa30.4■■■□□ 2.46
RUNDC3A-201ENST00000225441 UBR2Q8IWV8 1755 aa30.4■■■□□ 2.46
RUNDC3A-201ENST00000225441 BAG4O95429 457 aaKnown RBP30.4■■■□□ 2.46
RUNDC3A-201ENST00000225441 KLHL40Q2TBA0 621 aa30.4■■■□□ 2.46
RUNDC3A-201ENST00000225441 SSFA2P28290 1259 aa30.39■■■□□ 2.46
RUNDC3A-201ENST00000225441 FKBP5Q13451 457 aaPredicted RBP30.39■■■□□ 2.46
RUNDC3A-201ENST00000225441 PIGBQ92521 554 aa30.39■■■□□ 2.46
RUNDC3A-201ENST00000225441 IL17RAQ96F46 866 aa30.39■■■□□ 2.46
RUNDC3A-201ENST00000225441 C5P01031 1676 aa30.39■■■□□ 2.45
RUNDC3A-201ENST00000225441 PRAMEF22A3QJZ6 481 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 TUBGCP6Q96RT7 1819 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 BCL9O00512 1426 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 KCPQ6ZWJ8 1503 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 A0A0G2JS52 829 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 ANAPC15P60006 121 aa30.38■■■□□ 2.45
RUNDC3A-201ENST00000225441 SNRPA1P09661 255 aaKnown RBP30.36■■■□□ 2.45
RUNDC3A-201ENST00000225441 MCCP23508 829 aa30.36■■■□□ 2.45
RUNDC3A-201ENST00000225441 QTRT2Q9H974 415 aaKnown RBP30.36■■■□□ 2.45
RUNDC3A-201ENST00000225441 RAB11FIP3O75154 756 aa30.34■■■□□ 2.45
RUNDC3A-201ENST00000225441 MX1P20591 662 aa30.34■■■□□ 2.45
RUNDC3A-201ENST00000225441 FOXD4L1Q9NU39 408 aa30.34■■■□□ 2.45
RUNDC3A-201ENST00000225441 CHPF2Q9P2E5 772 aa30.34■■■□□ 2.45
RUNDC3A-201ENST00000225441 APBB1O00213 710 aa30.33■■■□□ 2.45
RUNDC3A-201ENST00000225441 ONECUT3O60422 494 aaPredicted RBP30.33■■■□□ 2.45
RUNDC3A-201ENST00000225441 PRIM1P49642 420 aaKnown RBP30.33■■■□□ 2.45
RUNDC3A-201ENST00000225441 SYTL4Q96C24 671 aaPredicted RBP30.32■■■□□ 2.44
RUNDC3A-201ENST00000225441 ESYT1Q9BSJ8 1104 aa30.32■■■□□ 2.44
RUNDC3A-201ENST00000225441 DBF4Q9UBU7 674 aaPredicted RBP30.32■■■□□ 2.44
RUNDC3A-201ENST00000225441 ATG3Q9NT62 314 aa30.31■■■□□ 2.44
RUNDC3A-201ENST00000225441 ASAP1Q9ULH1 1129 aa30.31■■■□□ 2.44
RUNDC3A-201ENST00000225441 LAMB4A4D0S4 1761 aa30.31■■■□□ 2.44
RUNDC3A-201ENST00000225441 SSH3Q8TE77 659 aa30.3■■■□□ 2.44
RUNDC3A-201ENST00000225441 PANK2Q9BZ23 570 aa30.3■■■□□ 2.44
RUNDC3A-201ENST00000225441 EXOC6BQ9Y2D4 811 aa30.3■■■□□ 2.44
RUNDC3A-201ENST00000225441 PTCD1O75127 700 aaKnown RBP30.29■■■□□ 2.44
RUNDC3A-201ENST00000225441 UBTFL1P0CB47 393 aaPredicted RBP30.29■■■□□ 2.44
RUNDC3A-201ENST00000225441 ACSBG1Q96GR2 724 aa30.29■■■□□ 2.44
RUNDC3A-201ENST00000225441 USP16Q9Y5T5 823 aa30.29■■■□□ 2.44
RUNDC3A-201ENST00000225441 USP44Q9H0E7 712 aa30.28■■■□□ 2.44
RUNDC3A-201ENST00000225441 PHAXQ9H814 394 aaKnown RBP30.28■■■□□ 2.44
RUNDC3A-201ENST00000225441 RRAGDQ9NQL2 400 aaPredicted RBP30.27■■■□□ 2.44
RUNDC3A-201ENST00000225441 DDX49Q9Y6V7 483 aaKnown RBP30.27■■■□□ 2.44
RUNDC3A-201ENST00000225441 PNMA6EA0A0J9YXQ4 647 aa30.26■■■□□ 2.44
RUNDC3A-201ENST00000225441 CLCN1P35523 988 aa30.26■■■□□ 2.44
RUNDC3A-201ENST00000225441 DDX21Q9NR30 783 aaKnown RBP eCLIP30.26■■■□□ 2.44
RUNDC3A-201ENST00000225441 ANXA1P04083 346 aa30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 CHMLP26374 656 aa30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 ZNF445P59923 1031 aa30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 ZNF772Q68DY9 489 aaPredicted RBP30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 SEPT12Q8IYM1 358 aa30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 LRRFIP2Q9Y608 721 aaKnown RBP30.26■■■□□ 2.43
RUNDC3A-201ENST00000225441 PROSER3Q2NL68 480 aa30.25■■■□□ 2.43
RUNDC3A-201ENST00000225441 INTS4Q96HW7 963 aaKnown RBP30.25■■■□□ 2.43
RUNDC3A-201ENST00000225441 POLA2Q14181 598 aa30.24■■■□□ 2.43
RUNDC3A-201ENST00000225441 PDIA6Q15084 440 aa30.24■■■□□ 2.43
RUNDC3A-201ENST00000225441 HYPKQ9NX55 129 aa30.24■■■□□ 2.43
RUNDC3A-201ENST00000225441 CUL4AQ13619 759 aa30.23■■■□□ 2.43
RUNDC3A-201ENST00000225441 GAS2L3Q86XJ1 694 aa30.23■■■□□ 2.43
RUNDC3A-201ENST00000225441 VSIG10Q8N0Z9 540 aa30.23■■■□□ 2.43
RUNDC3A-201ENST00000225441 KAT6BQ8WYB5 2073 aa30.23■■■□□ 2.43
RUNDC3A-201ENST00000225441 LMBRD1Q9NUN5 540 aa30.22■■■□□ 2.43
RUNDC3A-201ENST00000225441 HSP90AB4PQ58FF6 505 aa30.22■■■□□ 2.43
RUNDC3A-201ENST00000225441 ERBB4Q15303 1308 aa30.2■■■□□ 2.43
RUNDC3A-201ENST00000225441 ARXQ96QS3 562 aa30.2■■■□□ 2.43
RUNDC3A-201ENST00000225441 HDAC5Q9UQL6 1122 aa30.19■■■□□ 2.42
RUNDC3A-201ENST00000225441 KCNQ2O43526 872 aa30.19■■■□□ 2.42
RUNDC3A-201ENST00000225441 NEK4P51957 841 aa30.19■■■□□ 2.42
RUNDC3A-201ENST00000225441 CCDC173Q0VFZ6 552 aa30.19■■■□□ 2.42
RUNDC3A-201ENST00000225441 MCTP1Q6DN14 999 aa30.19■■■□□ 2.42
RUNDC3A-201ENST00000225441 TEX13AQ9BXU3 409 aaPredicted RBP30.18■■■□□ 2.42
RUNDC3A-201ENST00000225441 ANP32BQ92688 251 aaKnown RBP30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 KIF1BPQ96EK5 621 aa30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 TMX3Q96JJ7 454 aa30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 PPP1R9BQ96SB3 815 aa30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 TRIM6-TRIM34B2RNG4 842 aa30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 MYL6BP14649 208 aa30.17■■■□□ 2.42
RUNDC3A-201ENST00000225441 RBM6P78332 1123 aaKnown RBP30.16■■■□□ 2.42
RUNDC3A-201ENST00000225441 LRP10Q7Z4F1 713 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms