RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
LIM2-201ENST00000221973 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
LIM2-201ENST00000221973 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
LIM2-201ENST00000221973 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
LIM2-201ENST00000221973 CHRNA5P30532 468 aa21.18■□□□□ 0.98
LIM2-201ENST00000221973 NFIXQ14938 502 aa21.18■□□□□ 0.98
LIM2-201ENST00000221973 TSPYL6Q8N831 410 aa21.18■□□□□ 0.98
LIM2-201ENST00000221973 PIM2Q9P1W9 311 aa21.18■□□□□ 0.98
LIM2-201ENST00000221973 EIF5P55010 431 aaKnown RBP21.16■□□□□ 0.98
LIM2-201ENST00000221973 TWISTNBQ3B726 338 aaPredicted RBP21.15■□□□□ 0.98
LIM2-201ENST00000221973 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
LIM2-201ENST00000221973 DALRD3Q5D0E6 543 aaKnown RBP21.14■□□□□ 0.97
LIM2-201ENST00000221973 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
LIM2-201ENST00000221973 EIF2S2P20042 333 aaKnown RBP21.13■□□□□ 0.97
LIM2-201ENST00000221973 STARD3NLO95772 234 aa21.12■□□□□ 0.97
LIM2-201ENST00000221973 HSPA6P17066 643 aa21.12■□□□□ 0.97
LIM2-201ENST00000221973 C9orf131Q5VYM1 1079 aa21.12■□□□□ 0.97
LIM2-201ENST00000221973 NECTIN2Q92692 538 aa21.12■□□□□ 0.97
LIM2-201ENST00000221973 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
LIM2-201ENST00000221973 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
LIM2-201ENST00000221973 VAMP4O75379 141 aa21.11■□□□□ 0.97
LIM2-201ENST00000221973 SERPINB2P05120 415 aa21.11■□□□□ 0.97
LIM2-201ENST00000221973 HOXB7P09629 217 aa21.11■□□□□ 0.97
LIM2-201ENST00000221973 DLEC1Q9Y238 1755 aa21.1■□□□□ 0.97
LIM2-201ENST00000221973 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
LIM2-201ENST00000221973 SBF1O95248 1867 aa21.09■□□□□ 0.97
LIM2-201ENST00000221973 SCN7AQ01118 1682 aa21.09■□□□□ 0.97
LIM2-201ENST00000221973 NMRK2Q9NPI5 230 aa21.09■□□□□ 0.97
LIM2-201ENST00000221973 TCERG1O14776 1098 aaKnown RBP21.08■□□□□ 0.97
LIM2-201ENST00000221973 A1BGP04217 495 aa21.08■□□□□ 0.97
LIM2-201ENST00000221973 TBC1D9BQ66K14 1250 aa21.07■□□□□ 0.96
LIM2-201ENST00000221973 A0A087WZG4 1122 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 CT47B1P0C2W7 299 aaPredicted RBP21.06■□□□□ 0.96
LIM2-201ENST00000221973 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
LIM2-201ENST00000221973 PIP4K2AP48426 406 aaPredicted RBP21.06■□□□□ 0.96
LIM2-201ENST00000221973 PRELPP51888 382 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 CCDC30Q5VVM6 783 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 BICDL1Q6ZP65 573 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 TBC1D2BQ9UPU7 963 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 ANKRD31Q8N7Z5 1873 aa21.06■□□□□ 0.96
LIM2-201ENST00000221973 RNF181Q9P0P0 153 aa21.05■□□□□ 0.96
LIM2-201ENST00000221973 TOMM70O94826 608 aa21.04■□□□□ 0.96
LIM2-201ENST00000221973 CAMTA2O94983 1202 aa21.04■□□□□ 0.96
LIM2-201ENST00000221973 CHMP4AQ9BY43 222 aa21.04■□□□□ 0.96
LIM2-201ENST00000221973 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
LIM2-201ENST00000221973 ANXA1P04083 346 aa21.03■□□□□ 0.96
LIM2-201ENST00000221973 MYL6BP14649 208 aa21.03■□□□□ 0.96
LIM2-201ENST00000221973 RASSF7Q02833 373 aa21.03■□□□□ 0.96
LIM2-201ENST00000221973 C2CD5Q86YS7 1000 aa21.03■□□□□ 0.96
LIM2-201ENST00000221973 STK31Q9BXU1 1019 aa21.03■□□□□ 0.96
LIM2-201ENST00000221973 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 PDIA6Q15084 440 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 PROSER3Q2NL68 480 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
LIM2-201ENST00000221973 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 TTLL6Q8N841 843 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 BCL2L13Q9BXK5 485 aa21.02■□□□□ 0.96
LIM2-201ENST00000221973 DBF4Q9UBU7 674 aaPredicted RBP21.02■□□□□ 0.96
LIM2-201ENST00000221973 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
LIM2-201ENST00000221973 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
LIM2-201ENST00000221973 BCORQ6W2J9 1755 aa21.01■□□□□ 0.95
LIM2-201ENST00000221973 SSH1Q8WYL5 1049 aa21.01■□□□□ 0.95
LIM2-201ENST00000221973 ZNF428Q96B54 188 aa21.01■□□□□ 0.95
LIM2-201ENST00000221973 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
LIM2-201ENST00000221973 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
LIM2-201ENST00000221973 SLC4A2P04920 1241 aa21■□□□□ 0.95
LIM2-201ENST00000221973 RARSP54136 660 aaKnown RBP21■□□□□ 0.95
LIM2-201ENST00000221973 CCDC24Q8N4L8 307 aa21■□□□□ 0.95
LIM2-201ENST00000221973 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
LIM2-201ENST00000221973 H0YIN7 160 aa20.99■□□□□ 0.95
LIM2-201ENST00000221973 NFKBIEO00221 500 aa20.99■□□□□ 0.95
LIM2-201ENST00000221973 ALDH1L2Q3SY69 923 aa20.99■□□□□ 0.95
LIM2-201ENST00000221973 BRIP1Q9BX63 1249 aa20.99■□□□□ 0.95
LIM2-201ENST00000221973 SMC4Q9NTJ3 1288 aa20.99■□□□□ 0.95
LIM2-201ENST00000221973 DZIP3Q86Y13 1208 aaKnown RBP20.98■□□□□ 0.95
LIM2-201ENST00000221973 RCAN3Q9UKA8 241 aa20.98■□□□□ 0.95
LIM2-201ENST00000221973 MRPL50Q8N5N7 158 aaKnown RBP20.97■□□□□ 0.95
LIM2-201ENST00000221973 RBM46Q8TBY0 533 aaKnown RBP20.97■□□□□ 0.95
LIM2-201ENST00000221973 HYPKQ9NX55 129 aa20.97■□□□□ 0.95
LIM2-201ENST00000221973 BCAR3O75815 825 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 LMNB1P20700 586 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 G2E3Q7L622 706 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 LRP10Q7Z4F1 713 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 NPM2Q86SE8 214 aaKnown RBP20.96■□□□□ 0.95
LIM2-201ENST00000221973 DNAJC5GQ8N7S2 189 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 SETDB2Q96T68 719 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 PHAXQ9H814 394 aaKnown RBP20.96■□□□□ 0.95
LIM2-201ENST00000221973 RRAGCQ9HB90 399 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
LIM2-201ENST00000221973 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
LIM2-201ENST00000221973 CCDC88AQ3V6T2 1871 aa20.95■□□□□ 0.94
LIM2-201ENST00000221973 PDE6BP35913 854 aa20.95■□□□□ 0.94
LIM2-201ENST00000221973 APLP1P51693 650 aa20.95■□□□□ 0.94
LIM2-201ENST00000221973 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.94
LIM2-201ENST00000221973 XAGE3Q8WTP9 111 aa20.95■□□□□ 0.94
LIM2-201ENST00000221973 ZC3H4Q9UPT8 1303 aaKnown RBP20.95■□□□□ 0.94
LIM2-201ENST00000221973 COPS6Q7L5N1 327 aa20.94■□□□□ 0.94
LIM2-201ENST00000221973 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.94
LIM2-201ENST00000221973 PDZRN3Q9UPQ7 1066 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms