RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 LDHCP07864 332 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 PYM1Q9BRP8 204 aaKnown RBP17.11■□□□□ 0.33
UBR5-201ENST00000220959 IDEP14735 1019 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
UBR5-201ENST00000220959 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
UBR5-201ENST00000220959 CCDC8Q9H0W5 538 aaPredicted RBP17.11■□□□□ 0.33
UBR5-201ENST00000220959 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
UBR5-201ENST00000220959 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
UBR5-201ENST00000220959 HFM1A2PYH4 1435 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 PDE4BQ07343 736 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 SYNCQ9H7C4 482 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
UBR5-201ENST00000220959 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 ARL1P40616 181 aaPredicted RBP17.1■□□□□ 0.33
UBR5-201ENST00000220959 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
UBR5-201ENST00000220959 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 SPECC1LQ69YQ0 1117 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 RAB3IL1Q8TBN0 382 aa17.1■□□□□ 0.33
UBR5-201ENST00000220959 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 VTI1AQ96AJ9 217 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 ESPNB1AK53 854 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
UBR5-201ENST00000220959 UBA7P41226 1012 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
UBR5-201ENST00000220959 DDX12PQ92771 950 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 FAM107BQ9H098 131 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 MMRN2Q9H8L6 949 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
UBR5-201ENST00000220959 BBXQ8WY36 941 aaPredicted RBP17.09■□□□□ 0.33
UBR5-201ENST00000220959 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
UBR5-201ENST00000220959 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.33
UBR5-201ENST00000220959 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.33
UBR5-201ENST00000220959 FSIP1Q8NA03 581 aa17.08■□□□□ 0.33
UBR5-201ENST00000220959 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 KANK3Q6NY19 840 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 CTR9Q6PD62 1173 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
UBR5-201ENST00000220959 TRMT1Q9NXH9 659 aaKnown RBP17.08■□□□□ 0.32
UBR5-201ENST00000220959 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 BMS1Q14692 1282 aaKnown RBP17.07■□□□□ 0.32
UBR5-201ENST00000220959 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 PLVAPQ9BX97 442 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 MCM10Q7L590 875 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.321e-7■■□□□ 12.6
UBR5-201ENST00000220959 CFAP57Q96MR6 1250 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
UBR5-201ENST00000220959 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 MAATS1Q7Z4T9 603 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
UBR5-201ENST00000220959 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 GPTP24298 496 aa17.07■□□□□ 0.32
UBR5-201ENST00000220959 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 EXOC5O00471 708 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 GSDMDP57764 484 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
UBR5-201ENST00000220959 CCDC155Q8N6L0 562 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
UBR5-201ENST00000220959 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
UBR5-201ENST00000220959 TBCAO75347 108 aaKnown RBP17.05■□□□□ 0.32
UBR5-201ENST00000220959 PHACTR2O75167 634 aa17.05■□□□□ 0.32
UBR5-201ENST00000220959 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
UBR5-201ENST00000220959 JADE2Q9NQC1 790 aa17.05■□□□□ 0.32
UBR5-201ENST00000220959 USP37Q86T82 979 aa17.05■□□□□ 0.32
UBR5-201ENST00000220959 OTUD6BQ8N6M0 293 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
UBR5-201ENST00000220959 LIMCH1Q9UPQ0 1083 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 RFC4P35249 363 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
UBR5-201ENST00000220959 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 NEMFO60524 1076 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 ST5P78524 1137 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 LDHAL6AQ6ZMR3 332 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 GOLGA6L9A6NEM1 432 aa17.04■□□□□ 0.32
UBR5-201ENST00000220959 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 EVI5LQ96CN4 794 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 ZWINTO95229 277 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms