RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ANXA1P04083 346 aa20.81■□□□□ 0.92
USB1-201ENST00000219281 ATF3P18847 181 aa20.81■□□□□ 0.92
USB1-201ENST00000219281 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
USB1-201ENST00000219281 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
USB1-201ENST00000219281 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
USB1-201ENST00000219281 PHF14O94880 888 aa20.8■□□□□ 0.92
USB1-201ENST00000219281 OS9Q13438 667 aaPredicted RBP20.8■□□□□ 0.92
USB1-201ENST00000219281 RUFY3Q7L099 469 aa20.8■□□□□ 0.92
USB1-201ENST00000219281 CNPY2Q9Y2B0 182 aa20.8■□□□□ 0.92
USB1-201ENST00000219281 MCM5P33992 734 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
USB1-201ENST00000219281 TPRNQ4KMQ1 711 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 PLEKHO1Q53GL0 409 aaPredicted RBP20.79■□□□□ 0.92
USB1-201ENST00000219281 HSP90AB4PQ58FF6 505 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 AKAP4Q5JQC9 854 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 ZNF530Q6P9A1 599 aaPredicted RBP20.79■□□□□ 0.92
USB1-201ENST00000219281 LIMCH1Q9UPQ0 1083 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 CPA1P15085 419 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 MPRIPQ6WCQ1 1025 aa20.79■□□□□ 0.92
USB1-201ENST00000219281 ZSCAN22P10073 491 aaPredicted RBP20.78■□□□□ 0.92
USB1-201ENST00000219281 GLIPR1L2Q4G1C9 344 aa20.78■□□□□ 0.92
USB1-201ENST00000219281 HOXB7P09629 217 aa20.78■□□□□ 0.92
USB1-201ENST00000219281 TERF1P54274 439 aa20.78■□□□□ 0.92
USB1-201ENST00000219281 TMEM87AQ8NBN3 555 aa20.78■□□□□ 0.92
USB1-201ENST00000219281 KIF1AQ12756 1690 aa20.77■□□□□ 0.92
USB1-201ENST00000219281 STX6O43752 255 aa20.77■□□□□ 0.92
USB1-201ENST00000219281 PTMAP06454 111 aaKnown RBP20.77■□□□□ 0.92
USB1-201ENST00000219281 AMOTQ4VCS5 1084 aa20.77■□□□□ 0.92
USB1-201ENST00000219281 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.77■□□□□ 0.92
USB1-201ENST00000219281 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 GLRX3O76003 335 aaKnown RBP20.76■□□□□ 0.91
USB1-201ENST00000219281 CASTP20810 708 aaKnown RBP20.76■□□□□ 0.91
USB1-201ENST00000219281 SYT1P21579 422 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 DIAPH3Q9NSV4 1193 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 TTC41PQ6P2S7 1318 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 USP42Q9H9J4 1324 aaKnown RBP20.76■□□□□ 0.91
USB1-201ENST00000219281 ADCY9O60503 1353 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
USB1-201ENST00000219281 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
USB1-201ENST00000219281 TEFQ10587 303 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 PXDNQ92626 1479 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 LARGE1O95461 756 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 PTH1RQ03431 593 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 CCDC183Q5T5S1 534 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 CLASRPQ8N2M8 674 aaKnown RBP20.75■□□□□ 0.91
USB1-201ENST00000219281 ERBB3P21860 1342 aa20.75■□□□□ 0.91
USB1-201ENST00000219281 RNMTO43148 476 aaKnown RBP20.74■□□□□ 0.91
USB1-201ENST00000219281 CSPP1Q1MSJ5 1256 aa20.74■□□□□ 0.91
USB1-201ENST00000219281 CHMP4AQ9BY43 222 aa20.74■□□□□ 0.91
USB1-201ENST00000219281 ALS2Q96Q42 1657 aa20.74■□□□□ 0.91
USB1-201ENST00000219281 F13A1P00488 732 aa20.74■□□□□ 0.91
USB1-201ENST00000219281 HYPKQ9NX55 129 aa20.74■□□□□ 0.91
USB1-201ENST00000219281 DCCP43146 1447 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 DTNBO60941 627 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 CADPS2Q86UW7 1296 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 RUFY2Q8WXA3 655 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 PRPF40BQ6NWY9 871 aaKnown RBP20.73■□□□□ 0.91
USB1-201ENST00000219281 CCDC83Q8IWF9 413 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 CABLES1Q8TDN4 633 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 JAKMIP1Q96N16 626 aaKnown RBP20.73■□□□□ 0.91
USB1-201ENST00000219281 ECHDC1Q9NTX5 307 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
USB1-201ENST00000219281 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
USB1-201ENST00000219281 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
USB1-201ENST00000219281 UBE2HP62256 183 aa20.72■□□□□ 0.91
USB1-201ENST00000219281 MTX1Q13505 466 aa20.72■□□□□ 0.91
USB1-201ENST00000219281 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
USB1-201ENST00000219281 FIBPO43427 364 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
USB1-201ENST00000219281 FAM184AQ8NB25 1140 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 DBF4Q9UBU7 674 aaPredicted RBP20.71■□□□□ 0.91
USB1-201ENST00000219281 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.71■□□□□ 0.913e-8■■□□□ 14.4
USB1-201ENST00000219281 LMO7Q8WWI1 1683 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 IFIT2P09913 472 aaKnown RBP20.71■□□□□ 0.91
USB1-201ENST00000219281 GJB2P29033 226 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 UVSSAQ2YD98 709 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
USB1-201ENST00000219281 RGPD5Q99666 1765 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 PDCL3Q9H2J4 239 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 TCHHQ07283 1943 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 UQCRHLA0A096LP55 91 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 LETM1O95202 739 aaPredicted RBP20.7■□□□□ 0.9
USB1-201ENST00000219281 UQCRHP07919 91 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 MPNDQ8N594 471 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 DDX54Q8TDD1 881 aaKnown RBP20.7■□□□□ 0.9
USB1-201ENST00000219281 USP25Q9UHP3 1055 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 ATP6V1DQ9Y5K8 247 aa20.7■□□□□ 0.9
USB1-201ENST00000219281 KDM3BQ7LBC6 1761 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 GPATCH3Q96I76 525 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 CAMTA1Q9Y6Y1 1673 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 CRYBG1Q9Y4K1 1723 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
USB1-201ENST00000219281 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
USB1-201ENST00000219281 ZSWIM6Q9HCJ5 1215 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 CYP46A1Q9Y6A2 500 aa20.69■□□□□ 0.9
USB1-201ENST00000219281 ALDH1L1O75891 902 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms