RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 RRAGCQ9HB90 399 aa19.88■□□□□ 0.77
UPK3A-201ENST00000216211 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
UPK3A-201ENST00000216211 LMNB1P20700 586 aa19.87■□□□□ 0.77
UPK3A-201ENST00000216211 ST5P78524 1137 aa19.87■□□□□ 0.77
UPK3A-201ENST00000216211 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
UPK3A-201ENST00000216211 NUP98P52948 1817 aa19.87■□□□□ 0.77
UPK3A-201ENST00000216211 WDR90Q96KV7 1748 aa19.86■□□□□ 0.77
UPK3A-201ENST00000216211 NFKBIEO00221 500 aa19.86■□□□□ 0.77
UPK3A-201ENST00000216211 C21orf2O43822 256 aa19.86■□□□□ 0.77
UPK3A-201ENST00000216211 NFE2L2Q16236 605 aa19.86■□□□□ 0.77
UPK3A-201ENST00000216211 CLEC4GQ6UXB4 293 aa19.86■□□□□ 0.77
UPK3A-201ENST00000216211 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
UPK3A-201ENST00000216211 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
UPK3A-201ENST00000216211 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
UPK3A-201ENST00000216211 ZNF652Q9Y2D9 606 aa19.85■□□□□ 0.77
UPK3A-201ENST00000216211 MAPK8IP3Q9UPT6 1336 aa19.84■□□□□ 0.77
UPK3A-201ENST00000216211 ZC3H4Q9UPT8 1303 aaKnown RBP19.84■□□□□ 0.77
UPK3A-201ENST00000216211 PNISRQ8TF01 805 aaKnown RBP19.84■□□□□ 0.77
UPK3A-201ENST00000216211 SRGNP10124 158 aa19.83■□□□□ 0.77
UPK3A-201ENST00000216211 APLP1P51693 650 aa19.83■□□□□ 0.77
UPK3A-201ENST00000216211 PNNQ9H307 717 aaKnown RBP19.83■□□□□ 0.77
UPK3A-201ENST00000216211 HLFQ16534 295 aa19.82■□□□□ 0.76
UPK3A-201ENST00000216211 STYK1Q6J9G0 422 aa19.82■□□□□ 0.76
UPK3A-201ENST00000216211 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
UPK3A-201ENST00000216211 CNKSR1Q969H4 720 aa19.82■□□□□ 0.76
UPK3A-201ENST00000216211 NIP7Q9Y221 180 aaKnown RBP eCLIP19.82■□□□□ 0.76
UPK3A-201ENST00000216211 GLTPD2A6NH11 291 aa19.81■□□□□ 0.76
UPK3A-201ENST00000216211 FAM177BA6PVY3 158 aa19.81■□□□□ 0.76
UPK3A-201ENST00000216211 EIF4A1P60842 406 aaKnown RBP19.81■□□□□ 0.76
UPK3A-201ENST00000216211 MASTLQ96GX5 879 aa19.81■□□□□ 0.76
UPK3A-201ENST00000216211 RALBP1Q15311 655 aa19.8■□□□□ 0.76
UPK3A-201ENST00000216211 PRPF40BQ6NWY9 871 aaKnown RBP19.8■□□□□ 0.76
UPK3A-201ENST00000216211 RGL2O15211 777 aa19.79■□□□□ 0.76
UPK3A-201ENST00000216211 TPTE2Q6XPS3 522 aa19.79■□□□□ 0.76
UPK3A-201ENST00000216211 RRP7AQ9Y3A4 280 aaKnown RBP19.79■□□□□ 0.76
UPK3A-201ENST00000216211 FSTL1Q12841 308 aa19.78■□□□□ 0.76
UPK3A-201ENST00000216211 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
UPK3A-201ENST00000216211 MYL6BP14649 208 aa19.77■□□□□ 0.76
UPK3A-201ENST00000216211 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
UPK3A-201ENST00000216211 TAOK3Q9H2K8 898 aa19.77■□□□□ 0.76
UPK3A-201ENST00000216211 LTBP3Q9NS15 1303 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 VEGFAP15692 232 aaPredicted RBP19.76■□□□□ 0.75
UPK3A-201ENST00000216211 NPR1P16066 1061 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 RIPK4P57078 832 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 HTRA3P83110 453 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 TTLL7Q6ZT98 887 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
UPK3A-201ENST00000216211 KLRG2A4D1S0 409 aaPredicted RBP19.75■□□□□ 0.75
UPK3A-201ENST00000216211 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
UPK3A-201ENST00000216211 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
UPK3A-201ENST00000216211 DNAJC5GQ8N7S2 189 aa19.75■□□□□ 0.75
UPK3A-201ENST00000216211 SMC1BQ8NDV3 1235 aa19.75■□□□□ 0.75
UPK3A-201ENST00000216211 TSPYL4Q9UJ04 414 aa19.75■□□□□ 0.75
UPK3A-201ENST00000216211 ERVV-1B6SEH8 477 aa19.74■□□□□ 0.75
UPK3A-201ENST00000216211 GTF2E1P29083 439 aaPredicted RBP19.74■□□□□ 0.75
UPK3A-201ENST00000216211 DPY19L2Q6NUT2 758 aa19.74■□□□□ 0.75
UPK3A-201ENST00000216211 MYBBP1AQ9BQG0 1328 aaKnown RBP19.74■□□□□ 0.75
UPK3A-201ENST00000216211 POTECB2RU33 542 aa19.73■□□□□ 0.75
UPK3A-201ENST00000216211 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
UPK3A-201ENST00000216211 C7orf43Q8WVR3 580 aa19.73■□□□□ 0.75
UPK3A-201ENST00000216211 ZBTB3Q9H5J0 574 aa19.73■□□□□ 0.75
UPK3A-201ENST00000216211 ABCC12Q96J65 1359 aa19.72■□□□□ 0.75
UPK3A-201ENST00000216211 CCDC93Q567U6 631 aa19.72■□□□□ 0.75
UPK3A-201ENST00000216211 NUTM1Q86Y26 1132 aa19.72■□□□□ 0.75
UPK3A-201ENST00000216211 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
UPK3A-201ENST00000216211 ANKRD36CQ5JPF3 1778 aa19.71■□□□□ 0.75
UPK3A-201ENST00000216211 GPTP24298 496 aa19.71■□□□□ 0.75
UPK3A-201ENST00000216211 OLFM4Q6UX06 510 aa19.71■□□□□ 0.75
UPK3A-201ENST00000216211 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
UPK3A-201ENST00000216211 UBN2Q6ZU65 1347 aa19.71■□□□□ 0.75
UPK3A-201ENST00000216211 EIF2S2P20042 333 aaKnown RBP19.7■□□□□ 0.74
UPK3A-201ENST00000216211 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
UPK3A-201ENST00000216211 ERBB4Q15303 1308 aa19.7■□□□□ 0.74
UPK3A-201ENST00000216211 DDNO94850 711 aaPredicted RBP19.69■□□□□ 0.74
UPK3A-201ENST00000216211 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
UPK3A-201ENST00000216211 FKBP4Q02790 459 aaKnown RBP eCLIP19.69■□□□□ 0.74
UPK3A-201ENST00000216211 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
UPK3A-201ENST00000216211 SCN4AP35499 1836 aa19.68■□□□□ 0.74
UPK3A-201ENST00000216211 PDIA6Q15084 440 aa19.68■□□□□ 0.74
UPK3A-201ENST00000216211 SUSD4Q5VX71 490 aa19.68■□□□□ 0.74
UPK3A-201ENST00000216211 GIGYF2Q6Y7W6 1299 aaKnown RBP19.68■□□□□ 0.74
UPK3A-201ENST00000216211 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
UPK3A-201ENST00000216211 IBTKQ9P2D0 1353 aaPredicted RBP19.68■□□□□ 0.74
UPK3A-201ENST00000216211 ANXA1P04083 346 aa19.67■□□□□ 0.74
UPK3A-201ENST00000216211 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
UPK3A-201ENST00000216211 LRP10Q7Z4F1 713 aa19.67■□□□□ 0.74
UPK3A-201ENST00000216211 ZNF34Q8IZ26 560 aa19.67■□□□□ 0.74
UPK3A-201ENST00000216211 KLRG1Q96E93 195 aa19.67■□□□□ 0.74
UPK3A-201ENST00000216211 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
UPK3A-201ENST00000216211 LAMB2P55268 1798 aa19.66■□□□□ 0.74
UPK3A-201ENST00000216211 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
UPK3A-201ENST00000216211 PROSER3Q2NL68 480 aa19.66■□□□□ 0.74
UPK3A-201ENST00000216211 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
UPK3A-201ENST00000216211 RIC1Q4ADV7 1423 aa19.66■□□□□ 0.74
UPK3A-201ENST00000216211 NTSR2O95665 410 aa19.65■□□□□ 0.74
UPK3A-201ENST00000216211 RTKN2Q8IZC4 609 aa19.65■□□□□ 0.74
UPK3A-201ENST00000216211 RUNDC1Q96C34 613 aa19.65■□□□□ 0.74
UPK3A-201ENST00000216211 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
UPK3A-201ENST00000216211 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
UPK3A-201ENST00000216211 RPGRQ92834 1020 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms