RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 KIF6Q6ZMV9 814 aa22.59■■□□□ 1.21
MRPL28-201ENST00000199706 N4BP2Q86UW6 1770 aaPredicted RBP22.58■■□□□ 1.21
MRPL28-201ENST00000199706 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
MRPL28-201ENST00000199706 HDGFL1Q5TGJ6 251 aa22.58■■□□□ 1.21
MRPL28-201ENST00000199706 SETDB2Q96T68 719 aa22.58■■□□□ 1.21
MRPL28-201ENST00000199706 EIF2S2P20042 333 aaKnown RBP22.57■■□□□ 1.2
MRPL28-201ENST00000199706 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
MRPL28-201ENST00000199706 DBF4Q9UBU7 674 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-201ENST00000199706 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
MRPL28-201ENST00000199706 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-201ENST00000199706 ANKRD31Q8N7Z5 1873 aa22.56■■□□□ 1.2
MRPL28-201ENST00000199706 ANKRD36CQ5JPF3 1778 aa22.56■■□□□ 1.2
MRPL28-201ENST00000199706 MYL6BP14649 208 aa22.56■■□□□ 1.2
MRPL28-201ENST00000199706 ZNF521Q96K83 1311 aa22.56■■□□□ 1.2
MRPL28-201ENST00000199706 ARFGEF1Q9Y6D6 1849 aa22.55■■□□□ 1.2
MRPL28-201ENST00000199706 GRIN3BO60391 1043 aa22.55■■□□□ 1.2
MRPL28-201ENST00000199706 CACNA1FO60840 1977 aa22.54■■□□□ 1.2
MRPL28-201ENST00000199706 GPR162Q16538 588 aa22.54■■□□□ 1.2
MRPL28-201ENST00000199706 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
MRPL28-201ENST00000199706 TTLL7Q6ZT98 887 aa22.54■■□□□ 1.2
MRPL28-201ENST00000199706 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
MRPL28-201ENST00000199706 CNBD1Q8NA66 436 aa22.53■■□□□ 1.2
MRPL28-201ENST00000199706 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
MRPL28-201ENST00000199706 CHPF2Q9P2E5 772 aa22.53■■□□□ 1.2
MRPL28-201ENST00000199706 RIC1Q4ADV7 1423 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 HLFQ16534 295 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 PRR5LQ6MZQ0 368 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 GIGYF2Q6Y7W6 1299 aaKnown RBP22.52■■□□□ 1.2
MRPL28-201ENST00000199706 C8orf58Q8NAV2 365 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
MRPL28-201ENST00000199706 DPEP1P16444 411 aa22.51■■□□□ 1.19
MRPL28-201ENST00000199706 YBX3P16989 372 aaKnown RBP eCLIP22.51■■□□□ 1.199e-6■□□□□ 10.4
MRPL28-201ENST00000199706 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
MRPL28-201ENST00000199706 NIP7Q9Y221 180 aaKnown RBP eCLIP22.51■■□□□ 1.19
MRPL28-201ENST00000199706 KCNA3P22001 575 aa22.5■■□□□ 1.19
MRPL28-201ENST00000199706 HSP90AB3PQ58FF7 597 aa22.5■■□□□ 1.19
MRPL28-201ENST00000199706 NBPF5PQ86XG9 351 aaPredicted RBP22.5■■□□□ 1.19
MRPL28-201ENST00000199706 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
MRPL28-201ENST00000199706 COL11A2P13942 1736 aaPredicted RBP22.49■■□□□ 1.19
MRPL28-201ENST00000199706 PDE6BP35913 854 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 ST5P78524 1137 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 TPTE2Q6XPS3 522 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 COPS6Q7L5N1 327 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 ZNF34Q8IZ26 560 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 NYXQ9GZU5 481 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
MRPL28-201ENST00000199706 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 ANXA1P04083 346 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 PARP10Q53GL7 1025 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 ZBTB3Q9H5J0 574 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 PIM2Q9P1W9 311 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 ARFGEF2Q9Y6D5 1785 aa22.48■■□□□ 1.19
MRPL28-201ENST00000199706 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
MRPL28-201ENST00000199706 NECTIN2Q92692 538 aa22.47■■□□□ 1.19
MRPL28-201ENST00000199706 KLRG2A4D1S0 409 aaPredicted RBP22.46■■□□□ 1.19
MRPL28-201ENST00000199706 TWISTNBQ3B726 338 aaPredicted RBP22.46■■□□□ 1.19
MRPL28-201ENST00000199706 TSPYL6Q8N831 410 aa22.46■■□□□ 1.19
MRPL28-201ENST00000199706 PLBD2Q8NHP8 589 aa22.46■■□□□ 1.19
MRPL28-201ENST00000199706 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
MRPL28-201ENST00000199706 UBN2Q6ZU65 1347 aa22.45■■□□□ 1.18
MRPL28-201ENST00000199706 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
MRPL28-201ENST00000199706 H0YIN7 160 aa22.44■■□□□ 1.18
MRPL28-201ENST00000199706 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
MRPL28-201ENST00000199706 NPHP1O15259 732 aa22.44■■□□□ 1.18
MRPL28-201ENST00000199706 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
MRPL28-201ENST00000199706 ANKRD13DQ6ZTN6 518 aa22.44■■□□□ 1.18
MRPL28-201ENST00000199706 SALL2Q9Y467 1007 aaPredicted RBP22.44■■□□□ 1.18
MRPL28-201ENST00000199706 CHRNA5P30532 468 aa22.43■■□□□ 1.18
MRPL28-201ENST00000199706 C2CD5Q86YS7 1000 aa22.43■■□□□ 1.18
MRPL28-201ENST00000199706 MIER1Q8N108 512 aa22.43■■□□□ 1.18
MRPL28-201ENST00000199706 TCIRG1Q13488 830 aa22.42■■□□□ 1.18
MRPL28-201ENST00000199706 PPP1R42Q7Z4L9 355 aa22.42■■□□□ 1.18
MRPL28-201ENST00000199706 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
MRPL28-201ENST00000199706 SPINK5Q9NQ38 1064 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-201ENST00000199706 NTSR2O95665 410 aa22.41■■□□□ 1.18
MRPL28-201ENST00000199706 AIMP1Q12904 312 aaKnown RBP22.41■■□□□ 1.18
MRPL28-201ENST00000199706 STYK1Q6J9G0 422 aa22.41■■□□□ 1.18
MRPL28-201ENST00000199706 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
MRPL28-201ENST00000199706 TNRC6CQ9HCJ0 1690 aaKnown RBP22.41■■□□□ 1.18
MRPL28-201ENST00000199706 E9PSI1 815 aa22.4■■□□□ 1.18
MRPL28-201ENST00000199706 SRGNP10124 158 aa22.4■■□□□ 1.18
MRPL28-201ENST00000199706 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
MRPL28-201ENST00000199706 VAMP4O75379 141 aa22.39■■□□□ 1.17
MRPL28-201ENST00000199706 DDX58O95786 925 aaKnown RBP22.39■■□□□ 1.17
MRPL28-201ENST00000199706 GPTP24298 496 aa22.39■■□□□ 1.17
MRPL28-201ENST00000199706 CRY2Q49AN0 593 aa22.39■■□□□ 1.17
MRPL28-201ENST00000199706 TTLL6Q8N841 843 aa22.39■■□□□ 1.17
MRPL28-201ENST00000199706 ABCC12Q96J65 1359 aa22.38■■□□□ 1.17
MRPL28-201ENST00000199706 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
MRPL28-201ENST00000199706 SUSD4Q5VX71 490 aa22.38■■□□□ 1.17
MRPL28-201ENST00000199706 NLRP10Q86W26 655 aa22.38■■□□□ 1.17
MRPL28-201ENST00000199706 MASTLQ96GX5 879 aa22.38■■□□□ 1.17
MRPL28-201ENST00000199706 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
MRPL28-201ENST00000199706 UTP14AQ9BVJ6 771 aaKnown RBP22.38■■□□□ 1.17
MRPL28-201ENST00000199706 YY1P25490 414 aa22.37■■□□□ 1.17
MRPL28-201ENST00000199706 GTF2E1P29083 439 aaPredicted RBP22.37■■□□□ 1.17
MRPL28-201ENST00000199706 SLC10A5Q5PT55 438 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms