RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 GOLGA3Q08378 1498 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEB-201ENST00000172853 FAM193BQ96PV7 902 aaPredicted RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 CCDC94Q9BW85 323 aaPredicted RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 ADAMTS2O95450 1211 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CDR2Q01850 454 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 TBC1D5Q92609 795 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ARID4AP29374 1257 aaPredicted RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 ORC3Q9UBD5 711 aaPredicted RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 CCDC7Q96M83 1385 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 SLC5A1P13866 664 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ZSCAN31Q96LW9 406 aaPredicted RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 SURF6O75683 361 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 PDE6BP35913 854 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 PPP1R42Q7Z4L9 355 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 PRPF40AO75400 957 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 KRT13P13646 458 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 RNF34Q969K3 372 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 IRAK4Q9NWZ3 460 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CCDC66A2RUB6 948 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ATP5J2-PTCD1G3V325 749 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 METTL24Q5JXM2 366 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ABCC8Q09428 1581 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ESYT2A0FGR8 921 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 FBXW4P57775 412 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 PLCB4Q15147 1175 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ERMNQ8TAM6 284 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CDCA7Q9BWT1 371 aaPredicted RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 ATP2A1O14983 1001 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ATP2B3Q16720 1220 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 EYA3Q99504 573 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 PYM1Q9BRP8 204 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 CCT6AP40227 531 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 PAFAH1B1P43034 410 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 APOBRQ0VD83 1088 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 MAP3K12Q12852 859 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 AFAP1L2Q8N4X5 818 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 GBP3Q9H0R5 595 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 IFI16Q16666 785 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 ERCC6LQ2NKX8 1250 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 IQCA1Q86XH1 822 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CCDC110Q8TBZ0 833 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 TACC3Q9Y6A5 838 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 PRPHP41219 470 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 NUTM2GQ5VZR2 741 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 C1orf228Q6PIY5 440 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CDC5LQ99459 802 aaKnown RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 GOLIM4O00461 696 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 OATP04181 439 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 MYL6BP14649 208 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 MXRA7P84157 204 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 SKAP1Q86WV1 359 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 CDAN1Q8IWY9 1227 aa3.95□□□□□ -1.78
NEB-201ENST00000172853 ZFP91Q96JP5 570 aaPredicted RBP3.95□□□□□ -1.78
NEB-201ENST00000172853 PTCD1O75127 700 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 GEN1Q17RS7 908 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CAVIN1Q6NZI2 390 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 ZGPATQ8N5A5 531 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 CABP1Q9NZU7 370 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 ERCC5P28715 1186 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 ATP2A2P16615 1042 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 LUZP1Q86V48 1076 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 RPUSD2Q8IZ73 545 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 OPTNQ96CV9 577 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 SMC6Q96SB8 1091 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 KIF11P52732 1056 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 MICALCLQ6ZW33 695 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 SRGAP1Q7Z6B7 1085 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 MAK16Q9BXY0 300 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC18Q5T9S5 1454 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 LMCD1Q9NZU5 365 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 DKC1O60832 514 aaKnown RBP eCLIP3.94□□□□□ -1.78
NEB-201ENST00000172853 TBCAO75347 108 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 KIF5BP33176 963 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 TRIM6Q9C030 488 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 FANCIQ9NVI1 1328 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 DPY19L2Q6NUT2 758 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC125Q86Z20 511 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 FBF1Q8TES7 1133 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC114Q96M63 670 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 RNF41Q9H4P4 317 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 SLC8A2Q9UPR5 921 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 FCHSD2O94868 740 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC184Q52MB2 194 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 PHLDB2Q86SQ0 1253 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 AFG3L2Q9Y4W6 797 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 PDE4BQ07343 736 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 SPECC1LQ69YQ0 1117 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC63Q8NA47 563 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 ZSCAN16Q9H4T2 348 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 MINDY4BA8MYZ0 360 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CALML3P27482 149 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 PRPF38AQ8NAV1 312 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 RIOK1Q9BRS2 568 aaKnown RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 SLC7A5P2Q9GIP4 190 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 PPFIA3O75145 1194 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 KANK4Q5T7N3 995 aaPredicted RBP3.94□□□□□ -1.78
NEB-201ENST00000172853 KCNH5Q8NCM2 988 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms