RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Sgsm3Q8VCZ6 750 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Ppp4r3bQ922R5 820 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Trap1Q9CQN1 706 aaKnown RBP12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Phlpp1Q8CHE4 1687 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Usp19Q3UJD6 1360 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Pnpla2Q8BJ56 486 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Zfp446Q8C9M8 523 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Plekhh2Q8C115 1491 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Tarbp1E9Q368 1579 aa12.97□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Ttc27Q8CD92 847 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Ncoa3O09000 1398 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 KdrP35918 1367 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 CemipQ8BI06 1361 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Birc5O70201 140 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Ciz1Q8VEH2 845 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Smc1bQ920F6 1248 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Skint5A7XUY5 1461 aa12.96□□□□□ -0.33
Srp54b-202ENSMUST00000218879 Tnnt1O88346 262 aa12.96□□□□□ -0.34
Srp54b-202ENSMUST00000218879 4930519G04RikQ9CPT7 205 aa12.96□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Cfap58B2RW38 873 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Diaph2O70566 1098 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 CebpzP53569 1052 aaKnown RBP12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 NeblQ0II04 452 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ap5z1Q3U829 807 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Sh2b1Q91ZM2 756 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Lonp2Q9DBN5 852 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Caskin1Q6P9K8 1431 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Topbp1Q6ZQF0 1515 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gle1Q8R322 699 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Znf24Q91VN1 368 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Kif18aQ91WD7 886 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Tbc1d7Q9D0K0 293 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Mybpc2Q5XKE0 1136 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ccdc30Q8BVF4 654 aa12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Smc1aQ9CU62 1233 aaKnown RBP12.95□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Lmtk3Q5XJV6 1424 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gm45015A0A140LII9 184 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gm18336A0A140LIU8 765 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Zfp213E9QAW0 468 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 M6prP24668 278 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Nat1P50294 290 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Eif3j1Q3UGC7 261 aaKnown RBP12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Eif3j2Q66JS6 263 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 PtprmP28828 1452 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Mphosph10Q810V0 681 aaKnown RBP12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Erlin2Q8BFZ9 340 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Kcnk13Q8R1P5 405 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 PawrQ925B0 333 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Fut8Q9WTS2 575 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Topaz1E5FYH1 1653 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Dusp9Q7TNL7 452 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Dnaaf4Q8R368 420 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Trim42Q9D2H5 723 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Spata1Q9D5R4 444 aa12.94□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Iqsec2Q5DU25 1478 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Epas1P97481 874 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Sap30bpQ02614 308 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Rbbp5Q8BX09 538 aaKnown RBP12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Nfu1Q9QZ23 255 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Plekhd1B2RPU2 505 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Brd1E9PZ26 1189 aaKnown RBP12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Rsph6aQ8CDR2 708 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Tlcd1Q99JT6 247 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gpt2Q8BGT5 522 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ccdc80Q8R2G6 949 aa12.93□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Xrn1P97789 1719 aaKnown RBP12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ppfia4B8QI36 1187 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Kifc2O08672 792 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Lig3P97386 1015 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ddx49Q4FZF3 480 aaKnown RBP12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ppp4r3aQ6P2K6 820 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Rassf10Q8BL43 508 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Mkrn1Q9QXP6 481 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Dhx9O70133 1380 aaKnown RBP12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Atp8b1Q148W0 1251 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Hif1aQ61221 836 aaKnown RBP12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 TxlnbQ8VBT1 685 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Trove2O08848 538 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Mns1Q61884 491 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 PreplQ8C167 725 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Tlr9Q9EQU3 1032 aa12.92□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Kcna4Q61423 654 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Ctnna3Q65CL1 895 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Cchcr1Q8K2I2 770 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Pank1Q8K4K6 548 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Noc3lQ8VI84 807 aaKnown RBP12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Asxl1P59598 1514 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Arhgef40Q3UPH7 1517 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Pacs2Q3V3Q7 862 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gbp4Q61107 620 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Rbm26Q6NZN0 1012 aaKnown RBP12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Lrrc42Q8R2U7 421 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Efcc1Q9JJF6 558 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 ErmapQ9JLN5 566 aa12.91□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Gadd45bP22339 160 aa12.9□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Cplx2P84086 134 aa12.9□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Znf532Q6NXK2 1036 aa12.9□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Clip2Q9Z0H8 1047 aa12.9□□□□□ -0.34
Srp54b-202ENSMUST00000218879 Zkscan7E9PVW1 718 aa12.9□□□□□ -0.34
Srp54b-202ENSMUST00000218879 AvenQ9D9K3 342 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 95 ms