RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Atp2b3Q0VF55 1220 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Esyt1Q3U7R1 1092 aaKnown RBP12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Txndc2Q6P902 515 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Tceal9Q9DD24 104 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Snap23O09044 210 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ifit2Q64112 472 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ddx11Q6AXC6 880 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ppp6r1Q7TSI3 856 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Dip2bQ3UH60 1574 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Tyro3P55144 880 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Gpatch11Q3UFS4 262 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Chpf2Q3UU43 768 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Slc4a10Q5DTL9 1118 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Kank4Q6P9J5 1016 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Sgsm2Q80U12 1005 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Brpf3B2KF05 1204 aaKnown RBP12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 CebpzP53569 1052 aaKnown RBP12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Cdk4P30285 303 aa12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ccdc66Q6NS45 935 aa12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 SnrkQ8VDU5 748 aa12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 N4bp2F8VQG7 1678 aaKnown RBP12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Leo1Q5XJE5 667 aa12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Psma5Q9Z2U1 241 aaKnown RBP12.84□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Nxf2Q4ZGD8 691 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Zfp113Q8C689 439 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 TnmdQ9EP64 317 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Map2P20357 1828 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cnnm3Q32NY4 713 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Babam1Q3UI43 333 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Zbtb22Q9Z0G7 638 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Ubr1O70481 1757 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Eef2kO08796 724 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 CoilQ5SU73 570 aa12.83□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Chd2E9PZM4 1827 aaKnown RBP12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Kcnb2A6H8H5 907 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cep57l1Q8VDS7 400 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Tubb6Q922F4 447 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Bloc1s2Q9CWG9 143 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 CgnP59242 1191 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Ifi35Q9D8C4 286 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Taf3Q5HZG4 932 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Dennd6aQ8BH65 605 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Ndufa8Q9DCJ5 172 aa12.82□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Gsdma3Q5Y4Y6 464 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 R3hcc1Q8BSI6 488 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Krt85Q9Z2T6 507 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Dmrt2Q8BG36 561 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Echdc1Q9D9V3 322 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Arfgef2A2A5R2 1792 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Rims2Q9EQZ7 1530 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Alpk3Q924C5 1678 aa12.81□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Lmod3E9QA62 571 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 U2af2P26369 475 aaKnown RBP12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Scaf1Q5U4C3 1256 aaKnown RBP12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cabp4Q8VHC5 271 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 RictorQ6QI06 1708 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Q3UJC8 639 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Rnf20Q5DTM8 973 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Col16a1Q8BLX7 1580 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 HnrnpmQ9D0E1 729 aaKnown RBP12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Rbm8a2A0A0N4SUH6 174 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cyp2d12Q8BVD2 504 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cdca7lQ922M5 438 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Rbm8aQ9CWZ3 174 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Nfe2l3Q9WTM4 660 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Sh3bgrQ9WUZ7 214 aa12.8□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Bend3Q6PAL0 825 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Dixdc1Q80Y83 711 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Atf7Q8R0S1 413 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Taf5lQ91WQ5 589 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Mctp1E9PV86 951 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Hmx1O70218 332 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cyp2d11P24457 504 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Ak2Q9WTP6 239 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Scn7aB1AYL1 1681 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Tnnt1O88346 262 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Dnaaf4Q8R368 420 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Plcd1Q8R3B1 756 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Dnajc14Q921R4 703 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Abcc4E9Q236 1325 aa12.79□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Pik3c2aQ61194 1686 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cfap58B2RW38 873 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Cfdp1O88271 295 aaKnown RBP12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Zap70P43404 618 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 EspnlQ3UYR4 1005 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Ubxn10Q8BG34 277 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Otud6bQ8K2H2 294 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Srgap1Q91Z69 1062 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Nlgn1Q99K10 843 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Slit3Q9WVB4 1523 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Eif3aP23116 1344 aaKnown RBP12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 FanccP50652 591 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Pkp1P97350 728 aaKnown RBP12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Fam228bQ497Q6 232 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Camta1A2A891 1682 aa12.78□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Zscan29E9Q5B4 869 aa12.77□□□□□ -0.36
Rnf40-206ENSMUST00000206914 F2rP30558 430 aa12.77□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Tlr7P58681 1050 aa12.77□□□□□ -0.36
Rnf40-206ENSMUST00000206914 Polr3gQ6NXY9 223 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms