RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Speer4bQ9D9F7 267 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 MpripP97434 1024 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Map3k9Q3U1V8 1077 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Pip4k2bQ80XI4 416 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Brf1Q8CFK2 676 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Carmil1Q6EDY6 1374 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Pde4bB1AWC9 736 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Satb1Q60611 764 aa10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 S100bP50114 92 aa10.65□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Zbtb16Q3UQ17 673 aa10.65□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tmx1Q8VBT0 278 aa10.65□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Sparcl1P70663 650 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Top1Q04750 767 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cracr2aQ3UP38 310 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Fchsd2Q3USJ8 740 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Dzip1lQ499E4 774 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tsga10Q6NY15 697 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Atp2b2Q9R0K7 1198 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tmed1Q3V009 227 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 PsapQ61207 557 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Eif2aQ8BJW6 581 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cavin4A2AMM0 362 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 FanciQ8K368 1330 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Samd15F6XZJ7 620 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Bin1O08539 588 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Nub1P54729 614 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Krt15Q61414 452 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Nop9Q8BMC4 636 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rassf2Q8BMS9 326 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Uchl5Q9WUP7 329 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Gpr161B2RPY5 545 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Zscan29E9Q5B4 869 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 ZfaP23607 742 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Brd3Q8K2F0 726 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Fam76aQ922G2 307 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 CarsQ9ER72 831 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ppp1r9aH3BJD6 1292 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ssrp1Q08943 708 aaKnown RBP10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 SkiQ60698 725 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rimbp2Q80U40 1072 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tmem87aQ8BXN9 555 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Flad1Q8R123 492 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Krt20Q9D312 431 aa10.64□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ppip5k2Q6ZQB6 1129 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tfip11Q9ERA6 838 aaKnown RBP10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 NinlQ6ZQ12 1394 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 NapbP28663 298 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cct6bQ61390 531 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Arhgap24Q8C4V1 747 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Prpf31Q8CCF0 499 aaKnown RBP10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Mical3Q8CJ19 1993 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 ErmnQ5EBJ4 281 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Klhl10Q9D5V2 608 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ptpdc1Q6NZK8 747 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tmem132aQ922P8 1018 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Golga1Q9CW79 758 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Zfpm1O35615 995 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc25Q78PG9 208 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tsr2Q8C8T8 191 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc7Q9D541 371 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cabp2Q9JLK4 216 aa10.63□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Api5O35841 504 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc91Q9D8L5 442 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Eps15P42567 897 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ppp1r12cQ3UMT1 782 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ankrd40Q5SUE8 363 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc57Q6PHN1 1016 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ublcp1Q8BGR9 318 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Capn12Q9ER56 720 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Hip1rQ9JKY5 1068 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tnip1Q9WUU8 647 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Exoc6bA6H5Z3 810 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Usp25P57080 1055 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cct4P80315 539 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Polr3dQ91WD1 398 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Zmat2Q9CPW7 199 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rufy3Q9D394 469 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Nop56Q9D6Z1 580 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc97Q9DBT3 340 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Pkd2l2Q9JLG4 621 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tagap1P0CAX8 505 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Fgfr1opQ66JX5 399 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Filip1Q9CS72 1211 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cep83Q9D5R3 692 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 2310002L09RikQ9D7L5 217 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc124Q9D8X2 217 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rsph10bE9PYQ0 876 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ranbp1P34022 203 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Speer4aF8VPX6 267 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Bms1Q6PGF5 1284 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Nap1l4Q78ZA7 375 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 SarnpQ9D1J3 210 aaKnown RBP10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rapgef4Q9EQZ6 1011 aa10.62□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tbc1d2bQ3U0J8 965 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Baiap2l1Q9DBJ3 514 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Lrrc23O35125 340 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Esyt2Q3TZZ7 845 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Fkbp5Q64378 456 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Krt77Q6IFZ6 572 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cecr2E9Q2Z1 1453 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms