RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Ddx58Q6Q899 926 aa18.17■□□□□ 0.5
Nup88-202ENSMUST00000108530 Anapc15-psA0A140T8L6 141 aa18.16■□□□□ 0.5
Nup88-202ENSMUST00000108530 Pm20d1Q8C165 503 aa18.16■□□□□ 0.5
Nup88-202ENSMUST00000108530 Ltb4r2Q9JJL9 360 aa18.16■□□□□ 0.5
Nup88-202ENSMUST00000108530 Nip7Q9CXK8 180 aaKnown RBP18.15■□□□□ 0.5
Nup88-202ENSMUST00000108530 Abcc4E9Q236 1325 aa18.15■□□□□ 0.5
Nup88-202ENSMUST00000108530 Ppip5k2Q6ZQB6 1129 aa18.15■□□□□ 0.5
Nup88-202ENSMUST00000108530 Shank2Q80Z38 1476 aa18.14■□□□□ 0.5
Nup88-202ENSMUST00000108530 Erbb4Q61527 1308 aa18.14■□□□□ 0.49
Nup88-202ENSMUST00000108530 Cct4P80315 539 aaKnown RBP18.14■□□□□ 0.49
Nup88-202ENSMUST00000108530 Ankib1Q6ZPS6 1085 aa18.14■□□□□ 0.49
Nup88-202ENSMUST00000108530 Fer1l6E0CZ42 1862 aa18.14■□□□□ 0.49
Nup88-202ENSMUST00000108530 Kiaa0232Q80U59 1396 aaKnown RBP18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 VgfQ0VGU4 617 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 Bsdc1Q80Y55 427 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 Mylk2Q8VCR8 613 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 Stk3Q9JI10 497 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 InsrrQ9WTL4 1300 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 Igflr1Q3U4N7 345 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 4930504O13RikQ8C5Z9 145 aa18.13■□□□□ 0.49
Nup88-202ENSMUST00000108530 Ank1Q02357 1862 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Myd88P22366 296 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Stk11ipQ3TAA7 1072 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Dhx38Q80X98 1228 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Sgsm1Q8BPQ7 1093 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Gm10093D3YYI8 482 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 AK157302I3ITR1 129 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Hdac1O09106 482 aaKnown RBP18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Isca1Q9D924 129 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Nav1Q8CH77 1875 aa18.12■□□□□ 0.49
Nup88-202ENSMUST00000108530 Jmjd4Q8BFT6 427 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 LratQ9JI60 231 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Nwd2Q6P5U7 1742 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Hsp90b1P08113 802 aaKnown RBP18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Gnat3Q3V3I2 354 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Unc5clQ6R653 518 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Slfnl1Q8BHW9 410 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Zbtb1Q91VL9 713 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Cwc25Q9DBF7 416 aa18.11■□□□□ 0.49
Nup88-202ENSMUST00000108530 Gigyf1Q99MR1 1044 aaKnown RBP18.1■□□□□ 0.49
Nup88-202ENSMUST00000108530 Stard3nlQ9DCI3 235 aa18.1■□□□□ 0.49
Nup88-202ENSMUST00000108530 DaxxO35613 739 aa18.1■□□□□ 0.49
Nup88-202ENSMUST00000108530 Mst1rQ62190 1378 aa18.1■□□□□ 0.49
Nup88-202ENSMUST00000108530 Kat6bQ8BRB7 1872 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 Fam228bQ497Q6 232 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 Mre11Q61216 706 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 Erc2Q6PH08 957 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 Sos2Q02384 1333 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 AppP12023 770 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 EspnlQ3UYR4 1005 aa18.09■□□□□ 0.49
Nup88-202ENSMUST00000108530 Q8C5K5 320 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Ttc19Q8CC21 365 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Rtn4Q99P72 1162 aaKnown RBP18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Tnrc6cQ3UHC0 1690 aaKnown RBP18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Sema6bO54951 886 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Miga2Q8BK03 593 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Brf1Q8CFK2 676 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Slc26a8Q8R0C3 999 aa18.08■□□□□ 0.48
Nup88-202ENSMUST00000108530 Neurod6P48986 337 aa18.07■□□□□ 0.48
Nup88-202ENSMUST00000108530 MypopQ8R4U1 393 aa18.07■□□□□ 0.48
Nup88-202ENSMUST00000108530 Rfx1P48377 963 aa18.06■□□□□ 0.48
Nup88-202ENSMUST00000108530 Taf5lQ91WQ5 589 aa18.06■□□□□ 0.48
Nup88-202ENSMUST00000108530 Catsper2A2ARP9 588 aa18.06■□□□□ 0.48
Nup88-202ENSMUST00000108530 Brpf1B2RRD7 1212 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 BcanQ61361 883 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Dis3l2Q8CI75 870 aaKnown RBP18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Cacna1sQ02789 1880 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Strn4P58404 760 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 4933416C03RikQ3V063 378 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Nyap1Q6PFX7 833 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 EngaseQ8BX80 734 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Klc3Q91W40 508 aa18.05■□□□□ 0.48
Nup88-202ENSMUST00000108530 Pde4dQ01063 747 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Tmem87bQ8BKU8 555 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Tshz3Q8CGV9 1081 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Fam213aQ9CYH2 218 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Nsfl1cQ9CZ44 370 aaKnown RBP18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Terf2O35144 541 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 GptQ8QZR5 496 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Chmp3Q9CQ10 224 aa18.04■□□□□ 0.48
Nup88-202ENSMUST00000108530 Ehd4Q9EQP2 541 aa18.03■□□□□ 0.48
Nup88-202ENSMUST00000108530 Il1rapl2Q9ERS6 686 aa18.03■□□□□ 0.48
Nup88-202ENSMUST00000108530 Bag3Q9JLV1 577 aaKnown RBP18.03■□□□□ 0.48
Nup88-202ENSMUST00000108530 Bicdl1A0JNT9 577 aa18.03■□□□□ 0.48
Nup88-202ENSMUST00000108530 Sf3a1Q8K4Z5 791 aaKnown RBP18.03■□□□□ 0.48
Nup88-202ENSMUST00000108530 Cers3Q1A3B0 383 aa18.02■□□□□ 0.48
Nup88-202ENSMUST00000108530 Gnl3lQ6PGG6 577 aaKnown RBP18.02■□□□□ 0.48
Nup88-202ENSMUST00000108530 AbraQ8BUZ1 375 aa18.02■□□□□ 0.48
Nup88-202ENSMUST00000108530 Rrs1Q9CYH6 365 aaKnown RBP18.02■□□□□ 0.48
Nup88-202ENSMUST00000108530 MetP16056 1379 aa18.02■□□□□ 0.48
Nup88-202ENSMUST00000108530 Lrp6O88572 1613 aa18.02■□□□□ 0.47
Nup88-202ENSMUST00000108530 GakQ99KY4 1305 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Cyp19a1P28649 503 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Vps33bP59016 617 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 DbnlQ62418 436 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Nlrp3Q8R4B8 1033 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Noc3lQ8VI84 807 aaKnown RBP18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Sult6b1P0CC03 303 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 NexnQ7TPW1 607 aa18.01■□□□□ 0.47
Nup88-202ENSMUST00000108530 Mrc1Q61830 1456 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms