RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Rsph6aQ8CDR2 708 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Kdm5bQ80Y84 1544 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Rbm19Q8R3C6 952 aaKnown RBP12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Prdm11A2AGX3 565 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Dact3Q0PHV7 610 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tspyl3Q3UYP3 334 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Ltv1Q6NSQ7 470 aaKnown RBP12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 DlatQ8BMF4 642 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Hoxb7P09024 217 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Spata24Q6P926 205 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Hs2st1Q8R3H7 356 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Arhgef12Q8R4H2 1543 aaKnown RBP12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Mybbp1aQ7TPV4 1344 aaKnown RBP12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tmem143Q8VD26 458 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 TnmdQ9EP64 317 aa12.16□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Frmpd2A0A140LI67 1392 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Slc1a4O35874 532 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Lamb3Q61087 1168 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Pnmal2G3X9N3 661 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 PzpQ61838 1495 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 GnaqP21279 359 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Mre11Q61216 706 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 RbsnQ80Y56 783 aa12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Nup88Q8CEC0 753 aaKnown RBP12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Ccar2Q8VDP4 922 aaKnown RBP12.15□□□□□ -0.46
Rtn3-204ENSMUST00000088171 ChgaP26339 463 aaKnown RBP12.15□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ptpdc1Q6NZK8 747 aa12.15□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Msl1Q6PDM1 616 aa12.15□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ipo4Q8VI75 1082 aa12.15□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Tbc1d8Q9Z1A9 1134 aa12.15□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Nfxl1E9Q8I7 918 aaKnown RBP12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 GancQ8BVW0 898 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Lman1Q9D0F3 517 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Tbc1d2B1AVH7 922 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Brf1Q8CFK2 676 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Vps36Q91XD6 386 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Uchl5Q9WUP7 329 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Rfx7F8VPJ6 1459 aa12.14□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Samd1D3YXK1 519 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Kcna6Q61923 529 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Zkscan1Q8BGS3 561 aaKnown RBP12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Arhgef6Q8K4I3 771 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Calml4Q91WQ9 153 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Pcdhb2Q91Y00 799 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 AW822073A0A0N4SUK1 652 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 HellsQ60848 821 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Nop53Q8BK35 484 aaKnown RBP12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ccdc158Q8CDI6 1109 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ccdc150Q8CDI7 1110 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Traf1P39428 409 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ccdc129Q14B48 1034 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Gas2l3Q3UWW6 683 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Smarcc2Q6PDG5 1213 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Slu7Q8BHJ9 585 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Pcdhb5Q91XZ5 792 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 NexmifQ5DTT1 1515 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Letm1Q9Z2I0 738 aa12.13□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Exoc8Q6PGF7 716 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Rbm17Q8JZX4 405 aaKnown RBP12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Cfap58B2RW38 873 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Gigyf1Q99MR1 1044 aaKnown RBP12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ctnnbl1Q9CWL8 563 aaKnown RBP12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Arhgef1Q61210 920 aaKnown RBP12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Nacc1Q7TSZ8 514 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Nop14Q8R3N1 860 aaKnown RBP12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Tmco5aQ9D9D5 303 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Speer4f2E9Q366 295 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Fam160b2Q80YR2 744 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Lrsam1Q80ZI6 727 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Rab3il1Q8VDV3 383 aa12.12□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Gm4758L7N258 96 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ppp1r1bQ60829 194 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ncapg2Q6DFV1 1138 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Taok3Q8BYC6 898 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Stoml1Q8CI66 399 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Rnf34Q99KR6 376 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ccdc183A2AJB1 534 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Pus7B7ZNL8 666 aaKnown RBP12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Znf518aB2RRF6 1478 aaKnown RBP12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ppp2r3aB2RXC8 1150 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Efcab2Q9CQ46 164 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 ParnQ8VDG3 624 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Pla2r1Q62028 1487 aa12.11□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Usp33Q8R5K2 909 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Krt79Q8VED5 531 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 MvpQ9EQK5 861 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Tnip1Q9WUU8 647 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Atp10aO54827 1508 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Trappc8E9PWG2 1437 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Mybl2P48972 704 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Fam204aQ8C6C7 236 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ttc14Q9CSP9 761 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Phf23Q8BSN5 401 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Znf394Q9Z1D9 521 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Mctp1E9PV86 951 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Znf692Q3U381 531 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Tmem266Q8BZB3 538 aa12.1□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Zcrb1Q9CZ96 217 aaKnown RBP12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Cabp5Q9JLK3 173 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 L1td1Q587J6 782 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms