RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Mcm10Q0VBD2 885 aa13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Pmfbp1Q9WVQ0 1022 aa13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Atp6v1aP50516 617 aaKnown RBP13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Polr3gQ6NXY9 223 aa13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Creld2Q9CYA0 350 aa13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 PaskQ8CEE6 1383 aa13.54□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Cfap58B2RW38 873 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Rnaseh1O70338 285 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Map2k1P31938 393 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Cabp2Q9JLK4 216 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Abca14E9Q8F8 1683 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 NexnQ7TPW1 607 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Dnajc5gQ8C632 165 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 SetQ9EQU5 289 aaKnown RBP13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Ccdc171E9Q1U1 1324 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Kif3cO35066 796 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Cdc37l1Q9CZP7 335 aa13.53□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Usp25P57080 1055 aa13.52□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Filip1lQ6P6L0 1131 aa13.52□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Adcy2Q80TL1 1090 aa13.52□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Cfap69Q8BH53 942 aa13.52□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Ccdc40Q8BI79 1192 aa13.52□□□□□ -0.24
Ssh1-201ENSMUST00000077689 Irx1P81068 480 aa13.52□□□□□ -0.25
Ssh1-201ENSMUST00000077689 L1td1Q587J6 782 aaKnown RBP13.52□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Anapc4Q91W96 807 aa13.52□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Elf2Q9JHC9 593 aa13.52□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Zbtb22Q9Z0G7 638 aa13.52□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Calcoco2A2A6M5 331 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Gm42641I6L9G2 585 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Npdc1Q64322 332 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 AtripQ8BMG1 785 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Sugp2Q8CH09 1067 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Stk11Q9WTK7 436 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Itsn1Q9Z0R4 1714 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 NktrP30415 1453 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 1700019A02RikA0A087WPV9 146 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 H2afxP27661 143 aaKnown RBP13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 St18Q80TY4 1045 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 4930519G04RikQ9CPT7 205 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 IghaA0A0A6YXW6 389 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Actn3O88990 900 aaKnown RBP13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Cfap157Q0VFX2 523 aa13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 SarnpQ9D1J3 210 aaKnown RBP13.51□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Gnai1B2RSH2 354 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Tpm4Q6IRU2 248 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Cetn4Q8K4K1 168 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Mis12Q9CY25 206 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Gnai3Q9DC51 354 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Nol11Q8BJW5 723 aaKnown RBP13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Synpo2Q91YE8 1087 aaKnown RBP13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Usp16Q99LG0 825 aa13.5□□□□□ -0.25
Ssh1-201ENSMUST00000077689 MpripP97434 1024 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Plekhm2Q80TQ5 1018 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Rsph6aQ8CDR2 708 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Uhrf1bp1lA2RSJ4 1457 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 HalP35492 657 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Wwc1Q5SXA9 1104 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Zscan22Q8BGS5 496 aa13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Arid5bQ8BM75 1188 aaKnown RBP13.49□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Ccdc162pQ0VG85 912 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Babam1Q3UI43 333 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Stk31Q99MW1 1018 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Zbtb12Q9Z150 459 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Phactr2B1AVP0 632 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Lig3P97386 1015 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Fbxw10Q5SUS0 1030 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Q3UJC8 639 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Trak2Q6P9N8 913 aa13.48□□□□□ -0.25
Ssh1-201ENSMUST00000077689 AppP12023 770 aa13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Plcb3P51432 1234 aaKnown RBP13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Smc1aQ9CU62 1233 aaKnown RBP13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Mns1Q61884 491 aa13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 4930550L24RikQ99PA7 320 aa13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Med4Q9CQA5 270 aa13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Uhrf1bp1B2KF50 1429 aa13.47□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Q3UPC7 1272 aa13.46□□□□□ -0.25
Ssh1-201ENSMUST00000077689 EappQ5BU09 281 aa13.46□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Ccdc83Q9D4V3 305 aa13.46□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Scp2P32020 547 aaKnown RBP13.46□□□□□ -0.25
Ssh1-201ENSMUST00000077689 Pibf1E9Q6K3 756 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Vamp4O70480 141 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 NefhP19246 1090 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Map9Q3TRR0 646 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 FntaQ61239 377 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Def6Q8C2K1 630 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ccar2Q8VDP4 922 aaKnown RBP13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Tlcd1Q99JT6 247 aa13.46□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Pik3r4Q8VD65 1358 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Dip2aQ8BWT5 1523 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ankrd35E9Q9D8 996 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ccdc102aQ3TMW1 549 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Klhdc4Q921I2 584 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ppp6r3Q922D4 844 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Samsn1P57725 372 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Phc3Q8CHP6 981 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Aldh1l1Q8R0Y6 902 aa13.45□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Frat2Q8K025 231 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 CenppQ9CZ92 286 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 CarsQ9ER72 831 aaKnown RBP13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Add3Q9QYB5 706 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms