RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Fam177a1Q8BR63 207 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Slx4ipQ9D7Y9 413 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Pdia3P27773 505 aaKnown RBP10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 SynmQ70IV5 1561 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Smarcc1P97496 1104 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Bloc1s4Q8VED2 215 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Kcnh5Q920E3 988 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Lman1Q9D0F3 517 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Gm10563F6WIE4 79 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Metap2O08663 478 aaKnown RBP10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ano6Q6P9J9 911 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Hmg20bQ9Z104 317 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ccdc112A0AUP1 442 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ampd3O08739 766 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Cfap157Q0VFX2 523 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 CenppQ9CZ92 286 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Cdca7Q9D0M2 382 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 F2rP30558 430 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Fam107bQ3TGF2 131 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Tmx4Q8C0L0 335 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Mrps27Q8BK72 415 aaKnown RBP10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ctnnbl1Q9CWL8 563 aaKnown RBP10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ttc21aQ8C0S4 1314 aa10.78□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Slc5a1Q8C3K6 665 aa10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Mybbp1aQ7TPV4 1344 aaKnown RBP10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 InsrP15208 1372 aa10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Brd1E9PZ26 1189 aaKnown RBP10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Api5O35841 504 aaKnown RBP10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Zap70P43404 618 aa10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Mex3cQ05A36 652 aaKnown RBP10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Naa15Q80UM3 865 aaKnown RBP10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Tmem87bQ8BKU8 555 aa10.77□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Hdhd2Q3UGR5 259 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ddx10Q80Y44 875 aaKnown RBP10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 U2af1l4Q8BGJ9 220 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Dnm1P39053 867 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 GphnQ8BUV3 769 aaKnown RBP10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 GmnnO88513 206 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 LifrP42703 1092 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Rbm19Q8R3C6 952 aaKnown RBP10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Q9D5Q8 446 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Homer1Q9Z2Y3 366 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 PaskQ8CEE6 1383 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ankrd26Q811D2 1581 aa10.77□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Rbm8a2A0A0N4SUH6 174 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 CalcaP70160 136 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Cacna2d4Q5RJF7 1116 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Cdca8Q8BHX3 289 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Brd3Q8K2F0 726 aaKnown RBP10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Krt23Q99PS0 422 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Rbm8aQ9CWZ3 174 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Eif4g1Q6NZJ6 1600 aaKnown RBP10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ddx46Q569Z5 1032 aaKnown RBP10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Rnf41Q8BH75 317 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Cetn2Q9R1K9 172 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 MycnP03966 462 aaKnown RBP10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Cyb5rlB1AS42 316 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Gadd45bP22339 160 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Tyro3P55144 880 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Gnat3Q3V3I2 354 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Fam76aQ922G2 307 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Smco2Q9DA21 347 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Tbc1d8Q9Z1A9 1134 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Klhl30Q8C3F7 581 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Caskin1Q6P9K8 1431 aa10.76□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Syt1P46096 421 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Slc7a3P70423 618 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Traf3ip1Q149C2 625 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Arhgef18Q6P9R4 1021 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Sh3d21Q7TSG5 549 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Zswim4Q8C7B8 1101 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 DonsonQ9QXP4 560 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Gdpd2Q9ESM6 539 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Gm21985Q6P6P5 1106 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Egfem1Q8C088 590 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ddx27Q921N6 760 aaKnown RBP10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Myd88P22366 296 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Nop53Q8BK35 484 aaKnown RBP10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ccdc94Q9D6J3 314 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Atp2b1G5E829 1220 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Tbc1d2bQ3U0J8 965 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 GptQ8QZR5 496 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 AU019823E9PUQ3 292 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Iffo1Q8BXL9 562 aa10.75□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Kmt5bQ3U8K7 883 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ppfibp1Q8C8U0 969 aaKnown RBP10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 4921504E06RikQ8CET2 560 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Tmx3Q8BXZ1 456 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Smc1aQ9CU62 1233 aaKnown RBP10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 ClasrpQ8CFC7 668 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 DymQ8CHY3 669 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Fez2Q6TYB5 348 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Idi2Q8BFZ6 227 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Cfap53Q9D439 514 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Fam170aQ66LM6 333 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Ctdp1Q7TSG2 960 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Il4rP16382 810 aa10.74□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 DroshaQ5HZJ0 1373 aaKnown RBP10.73□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Rbbp8nlA2ABX0 614 aa10.73□□□□□ -0.69
Prpf40a-201ENSMUST00000076313 Fam83gQ5SWY7 812 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms