RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 MypnQ5DTJ9 1315 aa31.31■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Ddx58Q6Q899 926 aa31.31■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Mrps5Q99N87 432 aaKnown RBP31.31■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Ppm1mQ8BU27 406 aa31.3■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 AK157302I3ITR1 129 aa31.28■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Isca1Q9D924 129 aa31.28■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Ltb4r2Q9JJL9 360 aa31.27■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Susd4Q8BH32 490 aa31.27■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Exoc6bA6H5Z3 810 aa31.26■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Aifm3Q3TY86 605 aa31.26■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Duox1A2AQ92 1551 aa31.26■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Hsp90ab1P11499 724 aaKnown RBP31.25■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Fkbp5Q64378 456 aa31.25■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 StrcQ8VIM6 1809 aa31.25■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Cyp2c67Q569X9 491 aa31.24■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Myd88P22366 296 aa31.24■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Ric3Q8BPM6 367 aa31.24■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 HellsQ60848 821 aa31.23■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 St5Q924W7 1134 aa31.23■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Dbndd1Q9CZ00 160 aa31.23■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Tango6Q8C3S2 1079 aa31.22■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Q3UPC7 1272 aa31.21■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Foxo3Q9WVH4 672 aa31.21■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Ttc41Q692V3 1318 aa31.2■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 IarsQ8BU30 1262 aa31.2■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Stard3nlQ9DCI3 235 aa31.2■■■□□ 2.59
Cpsf4-201ENSMUST00000070487 Mphosph10Q810V0 681 aaKnown RBP31.2■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Cwc25Q9DBF7 416 aa31.2■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Taf1dQ9D4V4 322 aa31.19■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Ehd4Q9EQP2 541 aa31.19■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Ank1Q02357 1862 aa31.18■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Kcna3P16390 528 aa31.17■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Bend3Q6PAL0 825 aa31.17■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Camkk2Q8C078 588 aa31.17■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Lmnb1P14733 588 aaKnown RBP31.16■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Q8C6G1 249 aa31.16■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Ripor2Q80U16 1078 aa31.15■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Aldh1l1Q8R0Y6 902 aa31.15■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Kcnn1Q9EQR3 537 aa31.15■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Cyp19a1P28649 503 aa31.14■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Soga3Q6NZL0 945 aa31.14■■■□□ 2.58
Cpsf4-201ENSMUST00000070487 Cct4P80315 539 aaKnown RBP31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Fam213aQ9CYH2 218 aa31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Foxo4Q9WVH3 505 aa31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Arap2Q8BZ05 1703 aa31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Zap70P43404 618 aa31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Lmbr1lQ9D1E5 489 aa31.13■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Upf2A2AT37 1269 aaKnown RBP31.12■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Cfdp1O88271 295 aaKnown RBP31.12■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Cops6O88545 324 aa31.12■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Eif4g2Q62448 906 aaKnown RBP31.12■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Strip1Q8C079 837 aa31.12■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Kif13bA0A286YCV9 1847 aa31.11■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 GptQ8QZR5 496 aa31.11■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 NmiO35309 314 aa31.1■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Gja5Q01231 358 aa31.1■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Eva1cP58659 440 aa31.09■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Rwdd1Q9CQK7 243 aa31.09■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Rnaseh2aQ9CWY8 301 aa31.09■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Ankrd31A0A140LI88 1765 aa31.09■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Clca2Q8BG22 942 aa31.09■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 L3mbtl2P59178 703 aa31.08■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Ciapin1Q8WTY4 309 aa31.08■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Rbm5Q91YE7 815 aaKnown RBP31.08■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 Ttc14Q9CSP9 761 aa31.08■■■□□ 2.57
Cpsf4-201ENSMUST00000070487 CanxP35564 591 aaKnown RBP31.07■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Igflr1Q3U4N7 345 aa31.07■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Znf330Q922H9 316 aa31.07■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Eif5bQ05D44 1216 aaKnown RBP31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Map3k13Q1HKZ5 959 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Cyp7a1Q64505 503 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Apbb1Q9QXJ1 710 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Mrc1Q61830 1456 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Cyp2c69E9PXC3 491 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Aknad1E9Q8N6 675 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Cyp2c40P56657 491 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Ttc19Q8CC21 365 aa31.06■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Frmpd3A0A140LIW3 1774 aa31.05■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Sgip1Q8VD37 806 aa31.05■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Casz1Q9CWL2 1761 aa31.04■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 SnrkQ8VDU5 748 aa31.04■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Col4a5Q63ZW6 1691 aa31.04■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Myh1Q5SX40 1942 aa31.02■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Grm8P47743 908 aa31.02■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Nutm1Q8BHP2 1126 aa31.02■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 TrhQ62361 256 aa31.02■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Eif3aP23116 1344 aaKnown RBP31.02■■■□□ 2.56
Cpsf4-201ENSMUST00000070487 Itgb4A2A863 1818 aa31.01■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Sh3tc1G3X9F6 1346 aa31.01■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Znf710Q3U288 666 aa31.01■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Atxn2lQ7TQH0 1049 aaKnown RBP31.01■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Atp6v0a2P15920 856 aa31■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Plcb3P51432 1234 aaKnown RBP30.99■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 EgfrQ01279 1210 aa30.99■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Zbtb38Q3LR78 1197 aa30.99■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Pdzph1Q8BGR1 1238 aa30.99■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Fhdc1Q3ULZ2 1149 aa30.98■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 PrimpolQ6P1E7 537 aa30.98■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 FktnQ8R507 461 aa30.98■■■□□ 2.55
Cpsf4-201ENSMUST00000070487 Sf3b3Q921M3 1217 aaKnown RBP30.98■■■□□ 2.55
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms