RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Brpf1B2RRD7 1212 aa22.08■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Atp6v1dP57746 247 aa22.08■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Rbm27Q5SFM8 1060 aaKnown RBP22.08■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Stard3nlQ9DCI3 235 aa22.08■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Crb1Q8VHS2 1405 aa22.07■■□□□ 1.12
Chmp6-201ENSMUST00000026434 DaxxO35613 739 aa22.07■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Antxr1Q9CZ52 562 aa22.07■■□□□ 1.12
Chmp6-201ENSMUST00000026434 InsrrQ9WTL4 1300 aa22.06■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Igfbp6P47880 238 aa22.06■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Gm12185Q5NCB2 835 aa22.06■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Unc5clQ6R653 518 aa22.06■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Taf5lQ91WQ5 589 aa22.06■■□□□ 1.12
Chmp6-201ENSMUST00000026434 PappaQ8R4K8 1624 aa22.05■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Pde4dQ01063 747 aa22.05■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Slc39a6Q8C145 765 aa22.05■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Ppp4r3aQ6P2K6 820 aa22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Cyp27a1Q9DBG1 533 aa22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Zkscan16A2ALW2 728 aa22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Vps33bP59016 617 aa22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Smg7Q5RJH6 1138 aaKnown RBP22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Cwc25Q9DBF7 416 aa22.04■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Syde2E9PUP1 1314 aa22.03■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Ppfia1B2RXQ2 1266 aa22.03■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Rfx1P48377 963 aa22.03■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Soga3Q6NZL0 945 aa22.03■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Bag3Q9JLV1 577 aaKnown RBP22.03■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Prr29B1ARI9 187 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 AK157302I3ITR1 129 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Pa2g4P50580 394 aaKnown RBP22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Nlrp1aQ2LKU9 1182 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Fam228bQ497Q6 232 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 NexnQ7TPW1 607 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Zkscan1Q8BGS3 561 aaKnown RBP22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 Isca1Q9D924 129 aa22.02■■□□□ 1.12
Chmp6-201ENSMUST00000026434 GpkowQ56A08 488 aa22.01■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Sik1Q60670 779 aa22.01■■□□□ 1.11
Chmp6-201ENSMUST00000026434 ApobrQ8VBT6 942 aa22.01■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Znf692Q3U381 531 aa22■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Ccnl1Q52KE7 532 aaKnown RBP22■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Mctp2Q5RJH2 878 aa22■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Prune1Q8BIW1 454 aa22■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Brf1Q8CFK2 676 aa22■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Exoc5Q3TPX4 708 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Ddx11Q6AXC6 880 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Pmfbp1Q9WVQ0 1022 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Lrp6O88572 1613 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Prl3d3A0A0M6L0J6 224 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Prl3d2F6R3P9 224 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Jmjd4Q8BFT6 427 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Pm20d1Q8C165 503 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Q8C5K5 320 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Ddx54Q8K4L0 874 aaKnown RBP21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Fam213aQ9CYH2 218 aa21.99■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Rad50P70388 1312 aa21.98■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Ms4a2P20490 235 aa21.98■■□□□ 1.11
Chmp6-201ENSMUST00000026434 KinQ8K339 391 aa21.98■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Gigyf1Q99MR1 1044 aaKnown RBP21.98■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Hdac6Q9Z2V5 1149 aa21.98■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Strn4P58404 760 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Smim5Q8BT42 78 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Slc26a8Q8R0C3 999 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Top1mtQ8R4U6 593 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 4933402E13RikQ9D4D2 429 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Mrc1Q61830 1456 aa21.97■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Myd88P22366 296 aa21.96■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Nsfl1cQ9CZ44 370 aaKnown RBP21.96■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Vwa3bJ9JI28 736 aa21.95■■□□□ 1.11
Chmp6-201ENSMUST00000026434 NmiO35309 314 aa21.95■■□□□ 1.11
Chmp6-201ENSMUST00000026434 Sos2Q02384 1333 aa21.95■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ints3Q7TPD0 1041 aaKnown RBP21.95■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ccdc7Q9D541 371 aa21.95■■□□□ 1.1
Chmp6-201ENSMUST00000026434 PhaxQ9JJT9 385 aaKnown RBP21.95■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ric1Q69ZJ7 1422 aa21.94■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Adora1Q60612 326 aa21.94■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Filip1lQ6P6L0 1131 aa21.94■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Tom1O88746 492 aa21.93■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ddx19aQ61655 478 aaKnown RBP21.93■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ciao1Q99KN2 339 aa21.93■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Utp18Q5SSI6 552 aaKnown RBP21.92■■□□□ 1.1
Chmp6-201ENSMUST00000026434 NfkbibQ60778 359 aa21.92■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Ankrd23Q812A3 306 aa21.92■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Znf526Q8BI66 675 aa21.92■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Cap2Q9CYT6 476 aa21.92■■□□□ 1.1
Chmp6-201ENSMUST00000026434 1700006A11RikB9EHI3 544 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Jakmip1Q8BVL9 626 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Cchcr1Q8K2I2 770 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Stk3Q9JI10 497 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Akap11E9Q777 1895 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Qtrt2B8ZXI1 415 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Sult6b1P0CC03 303 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 CalcaP70160 136 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Dcaf5Q80T85 946 aa21.91■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Kdm3aQ6PCM1 1323 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Shank3Q4ACU6 1730 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Gsdma2Q32M21 443 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 GapdhsQ64467 440 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Plcd4Q8K3R3 807 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Tmc2Q8R4P4 888 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 Add2Q9QYB8 725 aa21.9■■□□□ 1.1
Chmp6-201ENSMUST00000026434 MetP16056 1379 aa21.9■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms