RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Fmnl3Q6ZPF4 1028 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 4933428M09RikQ9D3X3 192 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Oas2E9Q9A9 742 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Bloc1s4Q8VED2 215 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ythdc2B2RR83 1445 aaKnown RBP19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fsd1Q7TPM6 496 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Shtn1Q8K2Q9 631 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Flad1Q8R123 492 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gjb2Q00977 226 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Lrrc9Q8CDN9 1456 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Btn2a2A4QPC6 514 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Hoxa7P02830 229 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 TxlnaQ6PAM1 554 aaKnown RBP19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Stxbp4Q9WV89 557 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 PaskQ8CEE6 1383 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Tex19.1Q99MV2 351 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Rab3il1Q8VDV3 383 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Kcnh5Q920E3 988 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Stx6Q9JKK1 255 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Supt6hQ62383 1726 aaKnown RBP19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Irgm2A0A140LIF8 407 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Chpf2Q3UU43 768 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gas2l3Q3UWW6 683 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Prm3Q62100 101 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 InsrP15208 1372 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gas2l2Q5SSG4 860 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fkbp5Q64378 456 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Hip1rQ9JKY5 1068 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ccdc112A0AUP1 442 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ano10Q8BH79 659 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gm10093D3YYI8 482 aa19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Hdac1O09106 482 aaKnown RBP19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Syt10Q9R0N4 523 aa19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 KdrP35918 1367 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ppfibp1Q8C8U0 969 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ddx27Q921N6 760 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Spata24Q6P926 205 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gbp2Q9Z0E6 589 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc152E9PX14 254 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Tmc2Q8R4P4 888 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rrs1Q9CYH6 365 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Cdc45Q9Z1X9 566 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Kif5bQ61768 963 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Trak2Q6P9N8 913 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Smarcc2Q6PDG5 1213 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc155Q80VJ8 648 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Map7d1A2AJI0 846 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Spty2d1Q68FG3 682 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ncapg2Q6DFV1 1138 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Strn4P58404 760 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Stim1P70302 685 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Magi3Q9EQJ9 1476 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ano6Q6P9J9 911 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ankrd1Q9CR42 319 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ebag9Q9D0V7 213 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Abcc6Q9R1S7 1498 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GmnnO88513 206 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rps6ka5Q8C050 863 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Cplx4Q80WM3 160 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Atp1a4Q9WV27 1032 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Irf5P56477 497 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sem1P60897 70 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc66Q6NS45 935 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 B4galnt4Q766D5 1034 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Pik3r4Q8VD65 1358 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ttll12Q3UDE2 639 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Tshz3Q8CGV9 1081 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Pms1Q8K119 917 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gsdma2Q32M21 443 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ankib1Q6ZPS6 1085 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Zfp597E9Q6S0 419 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Frat1P70339 274 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc121E9Q6D3 323 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GpkowQ56A08 488 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Smco2Q9DA21 347 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 EvcP57680 1005 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Lig3P97386 1015 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 PtprgQ05909 1442 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Lmo7E9PYF4 1699 aaKnown RBP19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GnpatP98192 678 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Brd3Q8K2F0 726 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Adck5Q80V03 582 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 SncbQ91ZZ3 133 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sf3b2Q3UJB0 878 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Eif3bQ8JZQ9 803 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 FanclQ9CR14 375 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 UvssaQ9D479 717 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Mipol1Q9D9F8 279 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Commd10Q8JZY2 202 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rbm5Q91YE7 815 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 PpanQ91YU8 470 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 ZwintQ9CQU5 252 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gucy1a3Q9ERL9 691 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Znf704Q9ERQ3 566 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ddx46Q569Z5 1032 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Trim27Q62158 513 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc57Q6PHN1 1016 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 TbcaP48428 108 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sdad1Q80UZ2 687 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Adgrl2Q8JZZ7 1487 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms