RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Fmnl3Q6ZPF4 1028 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 4933428M09RikQ9D3X3 192 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Oas2E9Q9A9 742 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Bloc1s4Q8VED2 215 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ythdc2B2RR83 1445 aaKnown RBP19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fsd1Q7TPM6 496 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Shtn1Q8K2Q9 631 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Flad1Q8R123 492 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gjb2Q00977 226 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Lrrc9Q8CDN9 1456 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Btn2a2A4QPC6 514 aa19.29■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Hoxa7P02830 229 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 TxlnaQ6PAM1 554 aaKnown RBP19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Stxbp4Q9WV89 557 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 PaskQ8CEE6 1383 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Tex19.1Q99MV2 351 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Rab3il1Q8VDV3 383 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Kcnh5Q920E3 988 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Stx6Q9JKK1 255 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Supt6hQ62383 1726 aaKnown RBP19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Irgm2A0A140LIF8 407 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Chpf2Q3UU43 768 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gas2l3Q3UWW6 683 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Prm3Q62100 101 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 InsrP15208 1372 aa19.28■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gas2l2Q5SSG4 860 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fkbp5Q64378 456 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Hip1rQ9JKY5 1068 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ccdc112A0AUP1 442 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ano10Q8BH79 659 aa19.27■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gm10093D3YYI8 482 aa19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Hdac1O09106 482 aaKnown RBP19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Syt10Q9R0N4 523 aa19.27■□□□□ 0.67
Col17a1-201ENSMUST00000026045 KdrP35918 1367 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ppfibp1Q8C8U0 969 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ddx27Q921N6 760 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Spata24Q6P926 205 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gbp2Q9Z0E6 589 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc152E9PX14 254 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Tmc2Q8R4P4 888 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rrs1Q9CYH6 365 aaKnown RBP19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Cdc45Q9Z1X9 566 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Kif5bQ61768 963 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Trak2Q6P9N8 913 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Smarcc2Q6PDG5 1213 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc155Q80VJ8 648 aa19.26■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Map7d1A2AJI0 846 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Spty2d1Q68FG3 682 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ncapg2Q6DFV1 1138 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Strn4P58404 760 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Stim1P70302 685 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Magi3Q9EQJ9 1476 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ano6Q6P9J9 911 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ankrd1Q9CR42 319 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ebag9Q9D0V7 213 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Abcc6Q9R1S7 1498 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GmnnO88513 206 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rps6ka5Q8C050 863 aa19.25■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Cplx4Q80WM3 160 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Atp1a4Q9WV27 1032 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Irf5P56477 497 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sem1P60897 70 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc66Q6NS45 935 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 B4galnt4Q766D5 1034 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Pik3r4Q8VD65 1358 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ttll12Q3UDE2 639 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Tshz3Q8CGV9 1081 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Pms1Q8K119 917 aa19.24■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gsdma2Q32M21 443 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ankib1Q6ZPS6 1085 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Zfp597E9Q6S0 419 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Frat1P70339 274 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc121E9Q6D3 323 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GpkowQ56A08 488 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Smco2Q9DA21 347 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 EvcP57680 1005 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Lig3P97386 1015 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 PtprgQ05909 1442 aa19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Lmo7E9PYF4 1699 aaKnown RBP19.23■□□□□ 0.67
Col17a1-201ENSMUST00000026045 GnpatP98192 678 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Brd3Q8K2F0 726 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Adck5Q80V03 582 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 SncbQ91ZZ3 133 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sf3b2Q3UJB0 878 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Eif3bQ8JZQ9 803 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 FanclQ9CR14 375 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 UvssaQ9D479 717 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Mipol1Q9D9F8 279 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Commd10Q8JZY2 202 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Rbm5Q91YE7 815 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 PpanQ91YU8 470 aaKnown RBP19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 ZwintQ9CQU5 252 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gucy1a3Q9ERL9 691 aa19.22■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Znf704Q9ERQ3 566 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ddx46Q569Z5 1032 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Trim27Q62158 513 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Ccdc57Q6PHN1 1016 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 TbcaP48428 108 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Sdad1Q80UZ2 687 aaKnown RBP19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Adgrl2Q8JZZ7 1487 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms