RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Api5O35841 504 aaKnown RBP9.37□□□□□ -0.91
Usp54-201ENSMUST00000022356 Taf12Q8VE65 161 aa9.37□□□□□ -0.91
Usp54-201ENSMUST00000022356 Dnajc10Q9DC23 793 aa9.37□□□□□ -0.91
Usp54-201ENSMUST00000022356 3425401B19RikD3Z1D3 1412 aa9.37□□□□□ -0.91
Usp54-201ENSMUST00000022356 Tbc1d2bQ3U0J8 965 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Shtn1Q8K2Q9 631 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Sptbn5F6UCX4 1208 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Kifc2O08672 792 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Slc1a4O35874 532 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Dzip1lQ499E4 774 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Kif5bQ61768 963 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Msl1Q6PDM1 616 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 PtprtQ99M80 1454 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Tmem143Q8VD26 458 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Tfip11Q9ERA6 838 aaKnown RBP9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Thrap3Q569Z6 951 aaKnown RBP9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Matr3Q8K310 846 aaKnown RBP9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 MthfsQ9D110 203 aa9.36□□□□□ -0.91
Usp54-201ENSMUST00000022356 Ccdc173A0JLY1 547 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Rabep1O35551 862 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Sh3d21Q7TSG5 549 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Bst2Q8R2Q8 172 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Chaf1aQ9QWF0 911 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Plekhg1F6S200 1446 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Arid3aQ62431 601 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Naa16Q9DBB4 864 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Atp7aQ64430 1491 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Rpgrip1lQ8CG73 1264 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Pms1Q8K119 917 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Aldh1l1Q8R0Y6 902 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Col20a1Q923P0 1320 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Tmed8Q3UHI4 326 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Fsd1Q7TPM6 496 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Fam13aQ8BGI4 693 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Rufy1Q8BIJ7 712 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Abcc6Q9R1S7 1498 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Mast1Q9R1L5 1570 aa9.35□□□□□ -0.91
Usp54-201ENSMUST00000022356 Epb41l2O70318 988 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Znhit6Q3UFB2 460 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Ddx31Q6NZQ2 687 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Slc26a8Q8R0C3 999 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Myom2Q14BI5 1463 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Nap1l1P28656 391 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Map3k2Q61083 619 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Hnrnpul1Q8VDM6 859 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Lmtk2Q3TYD6 1471 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 MeiocA2AG06 965 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 PrkcshO08795 521 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Q3UPC7 1272 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Utp3Q9JI13 469 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 PrimpolQ6P1E7 537 aa9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 HmcesQ8R1M0 353 aaKnown RBP9.34□□□□□ -0.91
Usp54-201ENSMUST00000022356 Ampd3O08739 766 aa9.34□□□□□ -0.92
Usp54-201ENSMUST00000022356 Atp6v1aP50516 617 aaKnown RBP9.34□□□□□ -0.92
Usp54-201ENSMUST00000022356 Wwc1Q5SXA9 1104 aa9.34□□□□□ -0.92
Usp54-201ENSMUST00000022356 Pdcl3Q8BVF2 240 aa9.34□□□□□ -0.92
Usp54-201ENSMUST00000022356 Krt25Q8VCW2 446 aa9.34□□□□□ -0.92
Usp54-201ENSMUST00000022356 Zcchc11B2RX14 1644 aaKnown RBP9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Zfyve16Q80U44 1528 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Ppfibp2O35711 882 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Ppp1r1bQ60829 194 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Trim11Q99PQ2 467 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Irgm2A0A140LIF8 407 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Phldb2Q8K1N2 1249 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Tmod4Q9JLH8 345 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Map3k13Q1HKZ5 959 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Hace1Q3U0D9 909 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Smarcc2Q6PDG5 1213 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Rdm1Q9CQK3 281 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Pde4aO89084 844 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Hoxd10P28359 340 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Kdm8Q9CXT6 414 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Letm1Q9Z2I0 738 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Apaf1O88879 1249 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Gm12185Q5NCB2 835 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Prpf4bQ61136 1007 aaKnown RBP9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Gripap1Q8VD04 806 aa9.33□□□□□ -0.92
Usp54-201ENSMUST00000022356 Atp2b3Q0VF55 1220 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Atf7ipQ7TT18 1306 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 GckrQ91X44 587 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 PrxO55103 1391 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Ankrd23Q812A3 306 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Hmg20bQ9Z104 317 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 MpndQ3TV65 487 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 AcrbpQ3V140 540 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Pik3c2gO70167 1506 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 AnkarA2RT91 1465 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Usp19Q3UJD6 1360 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Mphosph8Q3TYA6 858 aaKnown RBP9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Krt79Q8VED5 531 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Iqca1Q9CUL5 857 aa9.32□□□□□ -0.92
Usp54-201ENSMUST00000022356 Arhgap4B1AUY3 965 aa9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 TxlnaQ6PAM1 554 aaKnown RBP9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Lrrc7Q80TE7 1490 aa9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Btn2a2A4QPC6 514 aa9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Ssfa2Q922B9 1252 aa9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Nek4Q9Z1J2 792 aa9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Knop1Q9Z2Q2 478 aaKnown RBP9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Edc4Q3UJB9 1406 aaKnown RBP9.31□□□□□ -0.92
Usp54-201ENSMUST00000022356 Ptpdc1Q6NZK8 747 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 543.4 ms