RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Cyp2d11P24457 504 aa13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Prune1Q8BIW1 454 aa13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Tmx3Q8BXZ1 456 aa13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 LlphQ9D945 130 aaKnown RBP13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Col1a2Q01149 1372 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 GakQ99KY4 1305 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Anapc15P60007 132 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 CalcaP70160 136 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Bsdc1Q80Y55 427 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 AnlnQ8K298 1121 aaKnown RBP13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Atg3Q9CPX6 314 aa13.79□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Ubap1lG3UW59 384 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Hsp90b1P08113 802 aaKnown RBP13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 4930523C07RikE9Q2T4 99 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Vwa3bJ9JI28 736 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 ImpactO55091 318 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Ier5O89113 308 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 NexnQ7TPW1 607 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Efcab2Q9CQ46 164 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Tiam2Q6ZPF3 1715 aa13.78□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Shank3Q4ACU6 1730 aa13.77□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Pdcl3Q8BVF2 240 aa13.77□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Tpx2A2APB8 745 aaKnown RBP13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Zdhhc9P59268 364 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Echdc1Q9D9V3 322 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 PigbQ9JJQ0 542 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Hdac6Q9Z2V5 1149 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 AceP09470 1312 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 SlkO54988 1233 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Fkbp4P30416 458 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Bcl2l13P59017 434 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Ly75Q60767 1723 aa13.76□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Atp6v1dP57746 247 aa13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Cct4P80315 539 aaKnown RBP13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Bend3Q6PAL0 825 aa13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Sugp2Q8CH09 1067 aa13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 GckrQ91X44 587 aa13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Gdpd2Q9ESM6 539 aa13.75□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Smarce1O54941 411 aaKnown RBP13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Iqsec3Q3TES0 1195 aa13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Cap2Q9CYT6 476 aa13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Filip1lQ6P6L0 1131 aa13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Zcrb1Q9CZ96 217 aaKnown RBP13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 TefQ9JLC6 301 aa13.74□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Abca3Q8R420 1704 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Ppfibp2O35711 882 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Cnnm1Q0GA42 951 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Unc5clQ6R653 518 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Lrit1Q8K099 624 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Taf7Q9R1C0 341 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Adcy9P51830 1353 aa13.73□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Gm45015A0A140LII9 184 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Gm18336A0A140LIU8 765 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Zap70P43404 618 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Smg7Q5RJH6 1138 aaKnown RBP13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Phactr2B1AVP0 632 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Tlr7P58681 1050 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 KinQ8K339 391 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Pdia6Q922R8 440 aaKnown RBP13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Trim44Q9QXA7 346 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Pmfbp1Q9WVQ0 1022 aa13.72□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Exoc6bA6H5Z3 810 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Ms4a2P20490 235 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Slc4a10Q5DTL9 1118 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 PsapQ61207 557 aaKnown RBP13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Mum1Q6DID5 682 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 St18Q80TY4 1045 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Klc3Q91W40 508 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Gtf2a1Q99PM3 378 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Ccdc7Q9D541 371 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 Flt4P35917 1363 aa13.71□□□□□ -0.21
Ddx56-201ENSMUST00000004507 EvcP57680 1005 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 MpndQ3TV65 487 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Kiaa0319Q5SZV5 1081 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Prkab2Q6PAM0 271 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Ppp6r1Q7TSI3 856 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Dcaf5Q80T85 946 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Jakmip1Q8BVL9 626 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Tshz3Q8CGV9 1081 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Tmem119Q8R138 280 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Tceal9Q9DD24 104 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Rps6ka4Q9Z2B9 773 aa13.71□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Rad50P70388 1312 aa13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Vsig10D3YX43 558 aa13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Cfdp1O88271 295 aaKnown RBP13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Mphosph10Q810V0 681 aaKnown RBP13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Jmjd4Q8BFT6 427 aa13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Eif3aP23116 1344 aaKnown RBP13.7□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Strn4P58404 760 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Utp18Q5SSI6 552 aaKnown RBP13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Ddx19aQ61655 478 aaKnown RBP13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 SympkQ80X82 1284 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Flad1Q8R123 492 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Nav1Q8CH77 1875 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Brpf1B2RRD7 1212 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Pdzrn3Q69ZS0 1063 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Ints3Q7TPD0 1041 aaKnown RBP13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Kcnn1Q9EQR3 537 aa13.69□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Clcn1Q64347 994 aa13.68□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Afg3l2Q8JZQ2 802 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms