RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	NUP54	Q7Z3B4	507 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ANKRD33	Q7Z3H0	272 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TMEM135	Q86UB9	458 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TPRA1	Q86W33	373 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ATCAY	Q86WG3	371 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TGIF2LX	Q8IUE1	241 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	C10orf107	Q8IVU9	208 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	PRSS58	Q8IYP2	241 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ENTHD1	Q8IYW4	607 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	STPG2	Q8N412	459 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ZNF561	Q8N587	486 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ZNF248	Q8NDW4	579 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ITFG1	Q8TB96	612 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	LRRC46	Q96FV0	321 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ZC3HAV1L	Q96H79	300 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	FCRL5	Q96RD9	977 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	HBEGF	Q99075	208 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	PRDM6	Q9NQX0	595 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	KRT84	Q9NSB2	600 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	INTS6	Q9UL03	887 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TBX21	Q9UL17	535 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	GREB1	Q4ZG55	1949 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	GNG14	A0A1W2PPG7	69 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	FAM221A	A4D161	298 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ZNF840P	A6NDX5	716 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	C5orf52	A6NGY3	159 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CBX4	O00257	560 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ITGB1BP1	O14713	200 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CACNG3	O60359	315 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ERN1	O75460	977 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	IGLV3-27	P01718	113 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	APOC3	P02656	99 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	RHOQ	P17081	205 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CHRM3	P20309	590 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	XPA	P23025	273 aa	Predicted RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CD96	P40200	585 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	PTGFR	P43088	359 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	OMP	P47874	163 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	GLRB	P48167	497 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TGM4	P49221	684 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SLC26A5	P58743	744 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	RAB5B	P61020	215 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SKP1	P63208	163 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TWF1	Q12792	350 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TATDN3	Q17R31	274 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CCDC157	Q569K6	752 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SPANXN3	Q5MJ09	141 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SAMD4B	Q5PRF9	694 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	RIPPLY2	Q5TAB7	128 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	LINGO4	Q6UY18	593 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TMEM150A	Q86TG1	271 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	KLB	Q86Z14	1044 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	POMGNT2	Q8NAT1	580 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SPPL2B	Q8TCT7	592 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CANT1	Q8WVQ1	401 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	OTULIN	Q96BN8	352 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	AURKB	Q96GD4	344 aa	Predicted RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931		Q96MT0	163 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TEFM	Q96QE5	360 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SPON2	Q9BUD6	331 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SEMA4C	Q9C0C4	833 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	ZNF700	Q9H0M5	742 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SMG9	Q9H0W8	520 aa	Known RBP	7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SEMA6C	Q9H3T2	930 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	C3orf14	Q9HBI5	128 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	EMC7	Q9NPA0	242 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	IL1RAP	Q9NPH3	570 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	TMEM248	Q9NWD8	314 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SAGE1	Q9NXZ1	904 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	SLC39A10	Q9ULF5	831 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	NPFFR2	Q9Y5X5	522 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	C5orf42	Q9H799	3197 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	CHD7	Q9P2D1	2997 aa		7.59	□□□□□ -1.19
RTTN-223	ENST00000640931	MICAL3	Q7RTP6	2002 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		A0A075B6Q4	140 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DHRS12	A0PJE2	317 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	BTBD17	A6NE02	478 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DRGX	A6NNA5	263 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		H7C1Q1	480 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC1A7	O00341	560 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FGF10	O15520	208 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PRKY	O43930	277 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TMEM127	O75204	238 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SNAPC5	O75971	98 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CXCL14	O95715	111 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARSA	P15289	507 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	JUND	P17535	347 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	MAPK1	P28482	360 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	OR1E1	P30953	314 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CORO1A	P31146	461 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CEACAM6	P40199	344 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	POU4F1	Q01851	419 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF155	Q12901	538 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PRPSAP1	Q14558	356 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	IRF3	Q14653	427 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PCLAF	Q15004	111 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	LARS2	Q15031	903 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNHIT3	Q15649	155 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TOMM34	Q15785	309 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	UGT3A2	Q3SY77	523 aa		7.58	□□□□□ -1.2

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