RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 TOR1BO14657 336 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 TBX6O95947 436 aaPredicted RBP9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 NR2F6P10588 404 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 TARDBPQ13148 414 aaKnown RBP eCLIP9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 APOFQ13790 326 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 GPR68Q15743 365 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 AMZ1Q400G9 498 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 IKBIPQ70UQ0 350 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 UBE3DQ7Z6J8 389 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 ZNF605Q86T29 641 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 PRSS58Q8IYP2 241 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 KIAA1958Q8N8K9 716 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 SLC37A2Q8TED4 501 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 MTERF3Q96E29 417 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 WDR34Q96EX3 536 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 SLC6A18Q96N87 628 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 C3orf14Q9HBI5 128 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 GIN1Q9NXP7 522 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 P2RX2Q9UBL9 471 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 SCML1Q9UN30 329 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 CEPT1Q9Y6K0 416 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 SPACA6W5XKT8 324 aa9.16□□□□□ -0.94
CACNA1A-248ENST00000637774 INMTO95050 263 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 CCNB2O95067 398 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 HLCSP50747 726 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 MAZP56270 477 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ABATP80404 500 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 PRR5P85299 388 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 CDK5R2Q13319 367 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ZBED5Q49AG3 693 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 DCST1Q5T197 706 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ZC3H14Q6PJT7 736 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 NUP43Q8NFH3 380 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 OR5T3Q8NGG3 340 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 RELTQ969Z4 430 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ISOC1Q96CN7 298 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 NIPSNAP1Q9BPW8 284 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 TREX2Q9BQ50 279 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 NPLQ9BXD5 320 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 GSDMCQ9BYG8 508 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 KIR3DX1Q9H7L2 352 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 MMP17Q9ULZ9 603 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 SLCO1B1Q9Y6L6 691 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 KNTC1P50748 2209 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 OR2W5A6NFC9 320 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 B3GALT2O43825 422 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 OR10H2O60403 315 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 TNFRSF21O75509 655 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 UGT2B17O75795 530 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 UGT2B7P16662 529 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 PEBP1P30086 187 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 CRISP3P54108 245 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 SHC2P98077 582 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 RBBP4Q09028 425 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 TMED1Q13445 227 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 NNATQ16517 81 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 FXNQ16595 210 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 CCNJQ5T5M9 372 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 COL13A1Q5TAT6 717 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 FRMPD2BQ6IN97 320 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 BHLHB9Q6PI77 547 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 FAM92BQ6ZTR7 304 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ABTB1Q969K4 478 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 FCRL1Q96LA6 429 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 AMDHD1Q96NU7 426 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 SLC38A3Q99624 504 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 TMEFF2Q9UIK5 374 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 SLC9A8Q9Y2E8 581 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 ALPK2Q86TB3 2170 aa9.15□□□□□ -0.94
CACNA1A-248ENST00000637774 PLXNB3Q9ULL4 1909 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 C4orf51C9J302 202 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 B4GALT2O60909 372 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 ARAFP10398 606 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 C7P10643 843 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 ALAS2P22557 587 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 CRHBPP24387 322 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 IFNA8P32881 189 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 ARL4DP49703 201 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 CLK1P49759 484 aaKnown RBP9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 SEPHS1P49903 392 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 ITGA1P56199 1179 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 TUBA4AP68366 448 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 BNIP3Q12983 259 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 FBXO43Q4G163 708 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 ZNF773Q6PK81 442 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 PRR23CQ6ZRP0 262 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 PRSS41Q7RTY9 318 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 RSC1A1Q92681 617 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 CNRIP1Q96F85 164 aaPredicted RBP9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 LHPPQ9H008 270 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 EXOSC4Q9NPD3 245 aaKnown RBP9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 LHX9Q9NQ69 397 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 LYVE1Q9Y5Y7 322 aa9.15□□□□□ -0.95
CACNA1A-248ENST00000637774 MAP1BP46821 2468 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-248ENST00000637774 MYO15AQ9UKN7 3530 aa9.14□□□□□ -0.95
CACNA1A-248ENST00000637774 LOC100506127A0A0U1RQW1 187 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms