RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 FAM9CQ8IZT9 166 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 MMP21Q8N119 569 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 LRRC25Q8N386 305 aaPredicted RBP13.3□□□□□ -0.28
CTSA-219ENST00000607841 LIX1Q8N485 282 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 SIRT6Q8N6T7 355 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 SLC2A12Q8TD20 617 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 PSMF1Q92530 271 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 NCLNQ969V3 563 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 EXOSC8Q96B26 276 aaKnown RBP13.3□□□□□ -0.28
CTSA-219ENST00000607841 SENP5Q96HI0 755 aaPredicted RBP13.3□□□□□ -0.28
CTSA-219ENST00000607841 ZNF354BQ96LW1 612 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 TSSK3Q96PN8 268 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 DEFB126Q9BYW3 111 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 ZNF71Q9NQZ8 489 aaPredicted RBP13.3□□□□□ -0.28
CTSA-219ENST00000607841 TAS2R7Q9NYW3 318 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 GIMAP2Q9UG22 337 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 TP53TG5Q9Y2B4 290 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 ZFYVE26Q68DK2 2539 aa13.3□□□□□ -0.28
CTSA-219ENST00000607841 NUP210LQ5VU65 1888 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 PCSK5Q92824 1860 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 CDK2AP1O14519 115 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 DPM1O60762 260 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 TGDSO95455 350 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ATP1B1P05026 303 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 HPCAL1P37235 193 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 GPR143P51810 404 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 MFAP5Q13361 173 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ZNF267Q14586 743 aaPredicted RBP13.29□□□□□ -0.28
CTSA-219ENST00000607841 MEP1AQ16819 746 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 H3F3CQ6NXT2 135 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 IGFL3Q6UXB1 125 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 HSDL2Q6YN16 418 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 LGI4Q8N135 537 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ZADH2Q8N4Q0 377 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 OR5L2Q8NGL0 311 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
CTSA-219ENST00000607841 ZNF764Q96H86 408 aaPredicted RBP13.29□□□□□ -0.28
CTSA-219ENST00000607841 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 EGLN2Q96KS0 407 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ZNF681Q96N22 645 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 BBS4Q96RK4 519 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
CTSA-219ENST00000607841 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 CNPPD1Q9BV87 410 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 REEP4Q9H6H4 257 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 CXorf21Q9HAI6 301 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 SLCO1B3Q9NPD5 702 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ASIC5Q9NY37 505 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 STMN3Q9NZ72 180 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 BAIAP2L1Q9UHR4 511 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 MAPRE3Q9UPY8 281 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 NBEAQ8NFP9 2946 aa13.29□□□□□ -0.28
CTSA-219ENST00000607841 ITPR1Q14643 2758 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 MGAQ8IWI9 3026 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 DYTNA2CJ06 578 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 SDHDO14521 159 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 TBX19O60806 448 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 DDAH2O95865 285 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 PRPS1L1P21108 318 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 NTSP30990 170 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 SOX11P35716 441 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 CEBPEQ15744 281 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 ZNF750Q32MQ0 723 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 ACER2Q5QJU3 275 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 OGFOD2Q6N063 350 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 IGFL2Q6UWQ7 119 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 LARP4Q71RC2 724 aaKnown RBP eCLIP13.28□□□□□ -0.283e-9■□□□□ 8.9
CTSA-219ENST00000607841 SPATA19Q7Z5L4 167 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 RPS19BP1Q86WX3 136 aaKnown RBP13.28□□□□□ -0.28
CTSA-219ENST00000607841 CCDC116Q8IYX3 515 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 KIF2BQ8N4N8 673 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 NATD1Q8N6N6 113 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 CLHC1Q8NHS4 586 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 ZNF721Q8TF20 911 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 GFM2Q969S9 779 aaKnown RBP13.28□□□□□ -0.28
CTSA-219ENST00000607841 PPCDCQ96CD2 204 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 SH3BP4Q9P0V3 963 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 ERVK-19Q9WJR5 959 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 CCDC88CQ9P219 2028 aa13.28□□□□□ -0.28
CTSA-219ENST00000607841 A0A1W2PS29 197 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 OR6C76A6NM76 312 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 FCHO1O14526 889 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 AKAP10O43572 662 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 SLITRK5O94991 958 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 LRATO95237 230 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 PDGFAP04085 211 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 IGKV3-11P04433 115 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 G6PDP11413 515 aa13.27□□□□□ -0.29
CTSA-219ENST00000607841 EPHA3P29320 983 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms