RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TSC22D4Q9Y3Q8 395 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 H0YIV9 168 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 TMPRSS11DO60235 418 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 KLK8O60259 260 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 HCN1O60741 890 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 WDR1O75083 606 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 LRATO95237 230 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 GPR75O95800 540 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 NR2F6P10588 404 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 ENDOUP21128 410 aaKnown RBP18.85■□□□□ 0.61
TRIM47-207ENST00000593089 CASQ1P31415 396 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 BSGP35613 385 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 ALDH18A1P54886 795 aaKnown RBP18.85■□□□□ 0.61
TRIM47-207ENST00000593089 RIPPLY3P57055 190 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 MYBPHQ13203 477 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 GTF2H2Q13888 395 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 UAP1Q16222 522 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-207ENST00000593089 SPRED3Q2MJR0 410 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 GTF2H2CQ6P1K8 395 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 GOLGA7Q7Z5G4 137 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 CLYBLQ8N0X4 340 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 FBXW8Q8N3Y1 598 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 OR10G3Q8NGC4 313 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 RIT1Q92963 219 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 UCN3Q969E3 161 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 PELOQ9BRX2 385 aaKnown RBP18.85■□□□□ 0.61
TRIM47-207ENST00000593089 WWTR1Q9GZV5 400 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 IPPKQ9H8X2 491 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 ZFP64Q9NPA5 681 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 CPSF2Q9P2I0 782 aaKnown RBP18.85■□□□□ 0.61
TRIM47-207ENST00000593089 RNF11Q9Y3C5 154 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 ASB4Q9Y574 426 aa18.85■□□□□ 0.61
TRIM47-207ENST00000593089 A0A0A6YYD5 115 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 A0A1W2PR48 441 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 FAM58BPP0C7Q3 252 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 SERPINB3P29508 390 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 ADH7P40394 386 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 PIK3CGP48736 1102 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 NEK2P51955 445 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 ARFIP1P53367 373 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 SLC37A1P57057 533 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 GUCY2DQ02846 1103 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 ACAP2Q15057 778 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 EBPQ15125 230 aaKnown RBP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 PCBP2Q15366 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 MRM1Q6IN84 353 aaKnown RBP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 LIX1LQ8IVB5 337 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 DND1Q8IYX4 353 aaKnown RBP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 SLC6A15Q9H2J7 730 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 DDX31Q9H8H2 851 aaKnown RBP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 WDR41Q9HAD4 459 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 PROK2Q9HC23 129 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 CNIH4Q9P003 139 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 KCNN3Q9UGI6 736 aa18.84■□□□□ 0.61
TRIM47-207ENST00000593089 CHCHD2Q9Y6H1 151 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-207ENST00000593089 NINQ8N4C6 2090 aa18.83■□□□□ 0.61
TRIM47-207ENST00000593089 A0A096LPK6 155 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 ESYT3A0FGR9 886 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 HMX2A2RU54 273 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 LRRC3CA6NJW4 275 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 UGDHO60701 494 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 KLHL2O95198 593 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 SIX3O95343 332 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-207ENST00000593089 AIFM1O95831 613 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 GBAP04062 536 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 FBXO45P0C2W1 286 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-207ENST00000593089 TBL3Q12788 808 aaKnown RBP18.83■□□□□ 0.6
TRIM47-207ENST00000593089 CUL3Q13618 768 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 CES4AQ5XG92 561 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 KLC3Q6P597 504 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 SPNS3Q6ZMD2 512 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 CCDC91Q7Z6B0 441 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 NUDT13Q86X67 352 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 WDR20Q8TBZ3 569 aa18.83■□□□□ 0.6
TRIM47-207ENST00000593089 CNOT11Q9UKZ1 510 aaKnown RBP18.83■□□□□ 0.6
TRIM47-207ENST00000593089 ARHGAP21Q5T5U3 1957 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 MED13LQ71F56 2210 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 HIVEP1P15822 2718 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 A0A1W2PS29 197 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 OR6C76A6NM76 312 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 CLPSP04118 112 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 GABRA1P14867 456 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 TYK2P29597 1187 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 SSTR4P31391 388 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 TRPC1P48995 793 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 SLC7A5Q01650 507 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 TMEM64Q6YI46 380 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 WDR53Q7Z5U6 358 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-207ENST00000593089 TAGAPQ8N103 731 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 LRRC25Q8N386 305 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-207ENST00000593089 LIX1Q8N485 282 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 L3MBTL4Q8NA19 623 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 CDK15Q96Q40 435 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 DOHHQ9BU89 302 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 VPS11Q9H270 941 aa18.82■□□□□ 0.6
TRIM47-207ENST00000593089 TNPO3Q9Y5L0 923 aaKnown RBP18.82■□□□□ 0.6
TRIM47-207ENST00000593089 C2orf92A0A1B0GVN3 265 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 CCDC189A1A4V9 331 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 ZWINTO95229 277 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms