RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 STT3AP46977 705 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 PLGLB1Q02325 96 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TBL3Q12788 808 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 SLAMF1Q13291 335 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 SLC29A2Q14542 456 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 KHDRBS2Q5VWX1 349 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 OR4C11Q6IEV9 310 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TRILQ7L0X0 811 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TAOK1Q7L7X3 1001 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 DMRTC2Q8IXT2 367 aaPredicted RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 ZCCHC7Q8N3Z6 543 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 FAM109AQ8N4B1 249 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 RPRMLQ8N4K4 120 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TMEM251Q8N6I4 163 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 RHEBL1Q8TAI7 183 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 UBTD2Q8WUN7 234 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 DCAKDQ8WVC6 231 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TANKQ92844 425 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TTYH2Q9BSA4 534 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 FUT8Q9BYC5 575 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 UCK2Q9BZX2 261 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 IGSF5Q9NSI5 407 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 PNPLA3Q9NST1 481 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 PSD3Q9NYI0 1048 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 NUDT4Q9NZJ9 180 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TNFRSF10DQ9UBN6 386 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 INTS1Q8N201 2190 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 A0A087X1B8 175 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 A0A0G2JMM0 328 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 MYOCOSA0A1B0GUC4 107 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 A0A1W2PPB8 328 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 A0A1W2PRS3 328 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 FAM166BA8MTA8 275 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 KIR3DP1A8MWS1 328 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 NPIPA2E9PIF3 369 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 NPIPA3F8WFD2 350 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 UBXN8O00124 270 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 RTCAO00442 366 aaKnown RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 AQP7O14520 342 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 FGF17O60258 216 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 HCN1O60741 890 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 KERAO60938 352 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 ALDOAP04075 364 aaKnown RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 P04436 131 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 COX7A2P14406 83 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 EPB42P16452 691 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 CPN2P22792 545 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 ACVR2AP27037 513 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 MSX1P28360 303 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 SERPINB9P50453 376 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 RIPPLY3P57055 190 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 NUP107P57740 925 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 VSNL1P62760 191 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 SLC10A1Q14973 349 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 LIPJQ5W064 366 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 GRHL2Q6ISB3 625 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 FAM47EQ6ZV65 393 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 CCDC91Q7Z6B0 441 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 GPR180Q86V85 440 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 CCDC71Q8IV32 467 aaPredicted RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 DND1Q8IYX4 353 aaKnown RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 CENPLQ8N0S6 344 aaPredicted RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 PAQR8Q8TEZ7 354 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 RGMAQ96B86 450 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 RBM18Q96H35 190 aaKnown RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 TXLNGYQ9BZA5 131 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 RPF2Q9H7B2 306 aaKnown RBP9.6□□□□□ -0.87
VPS4B-207ENST00000591519 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF358Q9NW07 568 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 OPTCQ9UBM4 332 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 COPS7AQ9UBW8 275 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 KCNN3Q9UGI6 736 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 TBK1Q9UHD2 729 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 ITGB1BP2Q9UKP3 347 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 ATG4BQ9Y4P1 393 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 PCDHGB3Q9Y5G1 929 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 PCDHGA11Q9Y5H2 935 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 FAM215AQ9Y5M1 114 aa9.6□□□□□ -0.87
VPS4B-207ENST00000591519 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 NKX2-6A6NCS4 301 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 H0YIV9 168 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 PROM1O43490 865 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 KLK8O60259 260 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 UGDHO60701 494 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 WDR1O75083 606 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 KRT38O76015 456 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 NADKO95544 446 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SHBGP04278 402 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ABHD2P08910 425 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 GLI4P10075 376 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 CCL3P10147 92 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 PTX3P26022 381 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 GCAP28676 217 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 TLX1P31314 330 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 GALNSP34059 522 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SSR2P43308 183 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 MAGEA5P43359 124 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms