RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ACKR4Q9NPB9 350 aa17.81■□□□□ 0.44
TRAF4-216ENST00000586813 CNIH4Q9P003 139 aa17.81■□□□□ 0.44
TRAF4-216ENST00000586813 TSC22D4Q9Y3Q8 395 aa17.81■□□□□ 0.44
TRAF4-216ENST00000586813 ITPR3Q14573 2671 aa17.81■□□□□ 0.44
TRAF4-216ENST00000586813 ZNF469Q96JG9 3925 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-216ENST00000586813 IQANK1A0A1B0GTG1 560 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 PROM1O43490 865 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 OR10H2O60403 315 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 GPR75O95800 540 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 SERPINB3P29508 390 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 ARFIP1P53367 373 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 SLC37A1P57057 533 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 RPS13P62277 151 aaKnown RBP17.8■□□□□ 0.44
TRAF4-216ENST00000586813 ARSKQ6UWY0 536 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 MAATS1Q7Z4T9 603 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 NXNL1Q96CM4 212 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 RYDENQ9NUL5 291 aaKnown RBP17.8■□□□□ 0.44
TRAF4-216ENST00000586813 LYARQ9NX58 379 aaKnown RBP17.8■□□□□ 0.44
TRAF4-216ENST00000586813 QPCTLQ9NXS2 382 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 B4GALT7Q9UBV7 327 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 CNOT11Q9UKZ1 510 aaKnown RBP17.8■□□□□ 0.44
TRAF4-216ENST00000586813 ANGPTL3Q9Y5C1 460 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 PCDHGB3Q9Y5G1 929 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 PCDHGA11Q9Y5H2 935 aa17.8■□□□□ 0.44
TRAF4-216ENST00000586813 A0A0A6YYD5 115 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 GLOD5A6NK44 160 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 OR6C76A6NM76 312 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 WASHC1A8K0Z3 465 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 SYCE1LA8MT33 242 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 TMPRSS11DO60235 418 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 EEDO75530 441 aaKnown RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 CTAG2O75638 210 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 LRATO95237 230 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 CLPSP04118 112 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 NR2F6P10588 404 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 STX2P32856 288 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 PHEXP78562 749 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 NAB1Q13506 487 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ZNF267Q14586 743 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 SETDB1Q15047 1291 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 NTRK2Q16620 822 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 LIPJQ5W064 366 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 MRM1Q6IN84 353 aaKnown RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ULK2Q8IYT8 1036 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 CENPLQ8N0S6 344 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 SPATA4Q8NEY3 305 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 RHEBL1Q8TAI7 183 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 NEIL3Q8TAT5 605 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 KCTD4Q8WVF5 259 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 RIT1Q92963 219 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 JSRP1Q96MG2 331 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ACTR8Q9H981 624 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 DNAJB12Q9NXW2 375 aaKnown RBP17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ACOT9Q9Y305 439 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ASB4Q9Y574 426 aa17.79■□□□□ 0.44
TRAF4-216ENST00000586813 ANKHD1Q8IWZ3 2542 aaKnown RBP17.78■□□□□ 0.44
TRAF4-216ENST00000586813 A0A1W2PR48 441 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 H0YIV9 168 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 KRT38O76015 456 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 PTX3P26022 381 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-216ENST00000586813 BSGP35613 385 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 TRPC1P48995 793 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 IST1P53990 364 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 IRF9Q00978 393 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 C2orf54Q08AI8 447 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 CYP20A1Q6UW02 462 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 SEM1Q6ZVN7 128 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 CCDC25Q86WR0 208 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 ZZZ3Q8IYH5 903 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 LIX1Q8N485 282 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 FBF1Q8TES7 1133 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 REPS1Q96D71 796 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 ZNF597Q96LX8 424 aa17.78■□□□□ 0.44
TRAF4-216ENST00000586813 DDX31Q9H8H2 851 aaKnown RBP17.78■□□□□ 0.44
TRAF4-216ENST00000586813 HRNRQ86YZ3 2850 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-216ENST00000586813 HSPB2A8KAH6 182 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 UGDHO60701 494 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 AIFM1O95831 613 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 FAM58BPP0C7Q3 252 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 GFAPP14136 432 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 GDF1P27539 372 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 GALNSP34059 522 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 MAGEA4P43358 317 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 PLTPP55058 493 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 CUL3Q13618 768 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 SNTB1Q13884 538 aaKnown RBP17.77■□□□□ 0.44
TRAF4-216ENST00000586813 HSPB2Q16082 182 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 CPSF6Q16630 551 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRAF4-216ENST00000586813 PFKFB4Q16877 469 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 TBCELQ5QJ74 424 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 TAGAPQ8N103 731 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 ZNF441Q8N8Z8 693 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 RELL2Q8NC24 303 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-216ENST00000586813 FBXO25Q8TCJ0 367 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 NINJ1Q92982 152 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 WDR41Q9HAD4 459 aa17.77■□□□□ 0.44
TRAF4-216ENST00000586813 KIAA1549Q9HCM3 1950 aa17.77■□□□□ 0.43
TRAF4-216ENST00000586813 A0A087X1B8 175 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms