RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SUOXP51687 545 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZNF75DP51815 510 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 RPS14P62263 151 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 OGDHQ02218 1023 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 RFTN1Q14699 578 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 KIR2DS3Q14952 304 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PDK2Q15119 407 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 MED22Q15528 200 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CST6Q15828 149 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 DPYSL2Q16555 572 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CARD16Q5EG05 197 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CFAP58Q5T655 872 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SLC35E4Q6ICL7 350 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 NEK5Q6P3R8 708 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 IL27RAQ6UWB1 636 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 TMCO3Q6UWJ1 677 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PLXDC2Q6UX71 529 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 LINGO4Q6UY18 593 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 HIST3H2AQ7L7L0 130 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PRPF39Q86UA1 669 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZSCAN30Q86W11 494 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 NLRP14Q86W24 1093 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CACUL1Q86Y37 369 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 STK40Q8N2I9 435 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 BBS5Q8N3I7 341 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 HDDC3Q8N4P3 179 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 DCLK2Q8N568 766 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PAF1Q8N7H5 531 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 NIPA2Q8N8Q9 360 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PPHLN1Q8NEY8 458 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 OR2A12Q8NGT7 310 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 OR8K5Q8NH50 307 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 FAM76AQ8TAV0 307 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZNF564Q8TBZ8 553 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 WFDC5Q8TCV5 224 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 ANP32BQ92688 251 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZNF524Q96C55 264 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 ERLEC1Q96DZ1 483 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 C17orf77Q96MU5 243 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 GDAP1L1Q96MZ0 367 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZNF830Q96NB3 372 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 SEMA3CQ99985 751 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CALN1Q9BXU9 219 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 TFB2MQ9H5Q4 396 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 ZNF696Q9H7X3 374 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.71□□□□□ -1.82
NUP88-202ENST00000570937 WSB2Q9NYS7 404 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 IL36AQ9UHA7 158 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PILRBQ9UKJ0 227 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 R3HDM2Q9Y2K5 976 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 OR51B4Q9Y5P0 310 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SNX10Q9Y5X0 201 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 A0A0G2JNG1 304 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 A0A1W2PQ67 120 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ANTXRLA6NF34 631 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 FAM47DPA6NHR8 397 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 CYSRT1A8MQ03 144 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 PMS2P5A8MQ11 134 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 TMEM178BH3BS89 294 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 DFFAO00273 331 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SPOPO43791 374 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 DFNA5O60443 496 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SNAP91O60641 907 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 NEBLO76041 1014 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 LCA5LO95447 670 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SCGB1D1O95968 90 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 IGSF6O95976 241 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 GSRP00390 522 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 PTMAP06454 111 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 SELLP14151 372 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 TMEM11P17152 192 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 BCKDHBP21953 392 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ACSL1P33121 698 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 HSPA9P38646 679 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 CETN2P41208 172 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 PTGER3P43115 390 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 CSNK1DP48730 415 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 NR2C2P49116 596 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 STK19P49842 368 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 LIMK1P53667 647 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 NAP1L1P55209 391 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 CDH6P55285 790 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 C21orf59P57076 290 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 GSDMDP57764 484 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 RHOAP61586 193 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 POLR2LP62875 67 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 RPS21P63220 83 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 PRAMEP78395 509 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ARF5P84085 180 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 CNTN1Q12860 1018 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 OVGP1Q12889 678 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SGCGQ13326 291 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 HNRNPDQ14103 355 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 MESDQ14696 234 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 KIR2DS5Q14953 304 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ASTE1Q2TB18 679 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 LRRC38Q5VT99 294 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ACSM2BQ68CK6 577 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 C22orf39Q6P5X5 142 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms