RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 EBPLQ9BY08 206 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ACTL8Q9H568 366 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 GPN2Q9H9Y4 310 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 SUCOQ9UBS9 1254 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 EIF3LQ9Y262 564 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 MRPS33Q9Y291 106 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 PTRH2Q9Y3E5 179 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 POLR3HQ9Y535 204 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 A0A087WV48 116 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 LOC102723996A0A087X1L8 192 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 A0A1W2PQ72 361 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 TCRBV16S1A1N1A0A5B0 115 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 OR2W5A6NFC9 320 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 IDSB3KWA1 339 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 ANKRD28O15084 1053 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 KLK10O43240 276 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 PRMT3O60678 531 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 B4GALT2O60909 372 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 BCAS2O75934 225 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 GPR75O95800 540 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 AIFM1O95831 613 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 ALDOCP09972 364 aaKnown RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 G6PDP11413 515 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 MMP11P24347 488 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 FOLR3P41439 243 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 DIO3P55073 304 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 CLDN8P56748 225 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 FOXL2P58012 376 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 MC1RQ01726 317 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 C2orf80Q0P641 193 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 DYNC1I2Q13409 638 aaKnown RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 SLC48A1Q6P1K1 146 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 RIMKLAQ8IXN7 391 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 LIX1Q8N485 282 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 POU5F2Q8N7G0 328 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 SH3GL3Q99963 347 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 FAIM2Q9BWQ8 316 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 BRINP2Q9C0B6 783 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 SOX17Q9H6I2 414 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-206ENST00000565990 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 PRTFDC1Q9NRG1 225 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 AIG1Q9NVV5 245 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM45AQ9NWC5 275 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 C3orf18Q9UK00 162 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 MKL2Q9ULH7 1088 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 GPR45Q9Y5Y3 372 aa11.84□□□□□ -0.51
SF3B3-206ENST00000565990 APC2O95996 2303 aa11.83□□□□□ -0.51
SF3B3-206ENST00000565990 ACACAQ13085 2346 aa11.83□□□□□ -0.51
SF3B3-206ENST00000565990 GABRR3A8MPY1 467 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 BBIP1A8MTZ0 92 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 E9PBE3 544 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 H3BNX3 289 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 RRP8O43159 456 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 KLHL41O60662 606 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 ALOX12BO75342 701 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PRKRAO75569 313 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 HEXBP07686 556 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 IL3P08700 152 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 FURINP09958 794 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PABPC4LP0CB38 370 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 NR2F6P10588 404 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 DDCP20711 480 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PRPS1L1P21108 318 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 ASMTP46597 345 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 RPS18P62269 152 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 SRSF6Q13247 344 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 ART3Q13508 389 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PDE7AQ13946 482 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 CEBPEQ15744 281 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 UGT8Q16880 541 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PRSS53Q2L4Q9 553 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 FAM69BQ5VUD6 431 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 VASH2Q86V25 355 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 SNX32Q86XE0 403 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 TICAM1Q8IUC6 712 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 SPACA3Q8IXA5 215 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 FAM9CQ8IZT9 166 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 FAM47BQ8NA70 645 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 COQ8BQ96D53 544 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF681Q96N22 645 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PTCHD1Q96NR3 888 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 C1orf50Q9BV19 199 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 WDR41Q9HAD4 459 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 NECTIN3Q9NQS3 549 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 C8orf4Q9NR00 106 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 SDR39U1Q9NRG7 319 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PSME2Q9UL46 239 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms