RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 LACC1Q8IV20 430 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 PM20D2Q8IYS1 436 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 TNIP2Q8NFZ5 429 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 STAG3L4Q8TBR4 150 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 DOK4Q8TEW6 326 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 PYROXD1Q8WU10 500 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 DIO2Q92813 273 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 RIT1Q92963 219 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 ZNF597Q96LX8 424 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 SH3GL2Q99962 352 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 SORBS1Q9BX66 1292 aaKnown RBP15.23■□□□□ 0.03
CMTM3-205ENST00000562707 ERVK-6Q9BXR3 956 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 WWTR1Q9GZV5 400 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 GSX1Q9H4S2 264 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-205ENST00000562707 DMRT3Q9NQL9 472 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 SMYD2Q9NRG4 433 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 OPTCQ9UBM4 332 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 CBLCQ9ULV8 474 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 ERVK-19Q9WJR5 959 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 ZNF407Q9C0G0 2248 aa15.23■□□□□ 0.03
CMTM3-205ENST00000562707 PHF3Q92576 2039 aaKnown RBP15.22■□□□□ 0.03
CMTM3-205ENST00000562707 ANKRD33BA6NCL7 494 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 TUBAL3A6NHL2 446 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 EFCAB8A8MWE9 144 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 K7EPI3 171 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 LRATO95237 230 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 GPR75O95800 540 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 RAB10P61026 200 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 ADAM8P78325 824 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 TNFRSF17Q02223 184 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 NTRK2Q16620 822 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 SPRED3Q2MJR0 410 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 C18orf63Q68DL7 685 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 MMP21Q8N119 569 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 ZCCHC7Q8N3Z6 543 aaKnown RBP15.22■□□□□ 0.03
CMTM3-205ENST00000562707 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 HSPBAP1Q96EW2 488 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 UBXN10Q96LJ8 280 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 GPR22Q99680 433 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 TIMP4Q99727 224 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 CPNE1Q99829 537 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 NUDT4Q9NZJ9 180 aa15.22■□□□□ 0.03
CMTM3-205ENST00000562707 PRRC2AP48634 2157 aaKnown RBP15.22■□□□□ 0.03
CMTM3-205ENST00000562707 CXorf49A8MYA2 514 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 TRIM3O75382 744 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 SNX4O95219 450 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 ACSL3O95573 720 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 RAF1P04049 648 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 EPXP11678 715 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 TACR1P25103 407 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 GP5P40197 560 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 PIK3CBP42338 1070 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 SLC37A1P57057 533 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 PCDH1Q08174 1060 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 CRYZQ08257 329 aaKnown RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 KEAP1Q14145 624 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 EBPQ15125 230 aaKnown RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 HLA-DQA1Q5Y7H0 255 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 GRHL2Q6ISB3 625 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 PAMR1Q6UXH9 720 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 MYLK4Q86YV6 388 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 HUS1BQ8NHY5 278 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 RBBP8Q99708 897 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 EPB41L4BQ9H329 900 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 ALG9Q9H6U8 611 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 WDR41Q9HAD4 459 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 DLL4Q9NR61 685 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 SNX15Q9NRS6 342 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 LYARQ9NX58 379 aaKnown RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.03
CMTM3-205ENST00000562707 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 SNX24Q9Y343 169 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 ANGPTL3Q9Y5C1 460 aa15.21■□□□□ 0.03
CMTM3-205ENST00000562707 C2orf92A0A1B0GVN3 265 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 SUPT3HB4E1H0 165 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 TP73O15350 636 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 SUPT3HO75486 399 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 EPB42P16452 691 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 PTX3P26022 381 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-205ENST00000562707 SSTR1P30872 391 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 GALNSP34059 522 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 MASP1P48740 699 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 ARFIP1P53367 373 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 HNRNPH2P55795 449 aaKnown RBP15.2■□□□□ 0.02
CMTM3-205ENST00000562707 WNT3P56703 355 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 RPP38P78345 283 aaKnown RBP15.2■□□□□ 0.02
CMTM3-205ENST00000562707 PHEXP78562 749 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 CBLBQ13191 982 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 TOMM20Q15388 145 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-205ENST00000562707 DEFB113Q30KQ7 82 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 NSUN5P2Q63ZY6 315 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 RAPH1Q70E73 1250 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 PACS2Q86VP3 889 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 TP53INP1Q96A56 240 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 PRDM14Q9GZV8 571 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 NMRAL1Q9HBL8 299 aa15.2■□□□□ 0.02
CMTM3-205ENST00000562707 RPH3AQ9Y2J0 694 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-205ENST00000562707 PCDHGA11Q9Y5H2 935 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms