RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 P4HA2O15460 535 aa3□□□□□ -1.93
VRK1-207ENST00000557352 PFKFB2O60825 505 aa3□□□□□ -1.93
VRK1-207ENST00000557352 FRAT2O75474 233 aaPredicted RBP3□□□□□ -1.93
VRK1-207ENST00000557352 KRT6AP02538 564 aa3□□□□□ -1.93
VRK1-207ENST00000557352 PRB2P02812 416 aaPredicted RBP3□□□□□ -1.93
VRK1-207ENST00000557352 KRT6BP04259 564 aa3□□□□□ -1.93
VRK1-207ENST00000557352 RPS12P25398 132 aaKnown RBP3□□□□□ -1.93
VRK1-207ENST00000557352 KRT6CP48668 564 aa3□□□□□ -1.93
VRK1-207ENST00000557352 HLCSP50747 726 aa3□□□□□ -1.93
VRK1-207ENST00000557352 CLDN17P56750 224 aa3□□□□□ -1.93
VRK1-207ENST00000557352 KNOP1Q1ED39 458 aaKnown RBP3□□□□□ -1.93
VRK1-207ENST00000557352 ZNF506Q5JVG8 444 aa3□□□□□ -1.93
VRK1-207ENST00000557352 UTF1Q5T230 341 aa3□□□□□ -1.93
VRK1-207ENST00000557352 ARMC4Q5T2S8 1044 aa3□□□□□ -1.93
VRK1-207ENST00000557352 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
VRK1-207ENST00000557352 C12orf60Q5U649 245 aa3□□□□□ -1.93
VRK1-207ENST00000557352 ATL3Q6DD88 541 aa3□□□□□ -1.93
VRK1-207ENST00000557352 TTC27Q6P3X3 843 aa3□□□□□ -1.93
VRK1-207ENST00000557352 TMEM64Q6YI46 380 aa3□□□□□ -1.93
VRK1-207ENST00000557352 OR8H2Q8N162 312 aa3□□□□□ -1.93
VRK1-207ENST00000557352 LSMEM1Q8N8F7 131 aa3□□□□□ -1.93
VRK1-207ENST00000557352 ESR2Q92731 530 aa3□□□□□ -1.93
VRK1-207ENST00000557352 SPSB1Q96BD6 273 aa3□□□□□ -1.93
VRK1-207ENST00000557352 IDI2Q9BXS1 227 aa3□□□□□ -1.93
VRK1-207ENST00000557352 UPF3BQ9BZI7 483 aaKnown RBP3□□□□□ -1.93
VRK1-207ENST00000557352 PHPT1Q9NRX4 125 aaPredicted RBP3□□□□□ -1.93
VRK1-207ENST00000557352 CLIC5Q9NZA1 410 aa3□□□□□ -1.93
VRK1-207ENST00000557352 RAI14Q9P0K7 980 aa3□□□□□ -1.93
VRK1-207ENST00000557352 BCCIPQ9P287 314 aaKnown RBP eCLIP3□□□□□ -1.93
VRK1-207ENST00000557352 ATP6V1DQ9Y5K8 247 aa3□□□□□ -1.93
VRK1-207ENST00000557352 COLEC10Q9Y6Z7 277 aa3□□□□□ -1.93
VRK1-207ENST00000557352 PLXNA1Q9UIW2 1896 aa3□□□□□ -1.93
VRK1-207ENST00000557352 LCTP09848 1927 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 DOCK3Q8IZD9 2030 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 FAM220BPB1ANY3 271 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 SIGLEC5O15389 551 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 PLOD3O60568 738 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 SEMA4FO95754 770 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 STAG3L1P0CL83 205 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CALM1P0DP23 149 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CALM2P0DP24 149 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CALM3P0DP25 149 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CD1DP15813 335 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 IFNAR1P17181 557 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 IL11P20809 199 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 ACHEP22303 614 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 EEF1DP29692 281 aaKnown RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 FCGR2BP31994 310 aaPredicted RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 FCGR2CP31995 323 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 BTDP43251 543 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 TDO2P48775 406 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 GABPAQ06546 454 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CYLC2Q14093 348 aaPredicted RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 KRT80Q6KB66 452 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 APOBEC3HQ6NTF7 200 aaKnown RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 SLC30A6Q6NXT4 461 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 DHRS11Q6UWP2 260 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 PIGWQ7Z7B1 504 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 IQCA1Q86XH1 822 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 TBC1D10CQ8IV04 446 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 CERS5Q8N5B7 392 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 KCTD6Q8NC69 237 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 KIAA1524Q8TCG1 905 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 BADQ92934 168 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 TEKT1Q969V4 418 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 ZBED3Q96IU2 234 aaPredicted RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 GDAP1L1Q96MZ0 367 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 SPATA33Q96N06 139 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 ANP32EQ9BTT0 268 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 TEX13BQ9BXU2 312 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 SLC39A8Q9C0K1 460 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 RABEP2Q9H5N1 569 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 WDR41Q9HAD4 459 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 LY9Q9HBG7 655 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 AATFQ9NY61 560 aaKnown RBP eCLIP2.99□□□□□ -1.93
VRK1-207ENST00000557352 MCM3APO60318 1980 aa2.99□□□□□ -1.93
VRK1-207ENST00000557352 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
VRK1-207ENST00000557352 ELP1O95163 1332 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 ERICH2A1L162 156 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 YDJCA8MPS7 323 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 H3BMM5 538 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 PPIP5K2O43314 1243 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 TIMM44O43615 452 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 PRKAB2O43741 272 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 STX6O43752 255 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 RECQL5O94762 991 aaPredicted RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 QDPRP09417 244 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 MYBL1P10243 752 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 SYT1P21579 422 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 FEN1P39748 380 aaKnown RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 MATKP42679 507 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 SLC1A4P43007 532 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 CRYBA2P53672 197 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 MTCP1P56278 107 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 HAND2P61296 217 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 IGLV3-21P80748 117 aaPredicted RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 RASA2Q15283 850 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 ZNF79Q15937 498 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 NHLRC3Q5JS37 347 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 AMIGO1Q86WK6 493 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms