RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ROS1P08922 2347 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 SH3D21A4FU49 640 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 ZNF354AO60765 605 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 LDB3O75112 727 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 STK16O75716 305 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 F7P08709 466 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 TMIGD3P0DMS9 266 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CYP4B1P13584 511 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 CPN1P15169 458 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 ALOX15P16050 662 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 NAGAP17050 411 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 CDC25BP30305 580 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 BUD31P41223 144 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CASP2P42575 452 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 CPA2P48052 419 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 MASP1P48740 699 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 SLC12A2P55011 1212 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 PCDH1Q08174 1060 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 TGFBIQ15582 683 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 Q5PR19 223 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 PRAMEF20Q5VT98 475 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 HLA-DQA1Q5Y7H0 255 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 RNF111Q6ZNA4 994 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 Q71RC1 249 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CXXC5Q7LFL8 322 aaKnown RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CXorf67Q86X51 503 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 C9orf40Q8IXQ3 194 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 C17orf47Q8NEP4 570 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 OR10G3Q8NGC4 313 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 LINC01560Q8TB33 94 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 RIT1Q92963 219 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 ANKRD9Q96BM1 317 aaPredicted RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CMTM7Q96FZ5 175 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 CAPZA3Q96KX2 299 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 DOCK7Q96N67 2140 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 CSF3RQ99062 836 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 SMR3AQ99954 134 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 RBM24Q9BX46 236 aaKnown RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 ANGPTL4Q9BY76 406 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 DERL2Q9GZP9 239 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 EPB41L4BQ9H329 900 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 UBQLN3Q9H347 655 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 PROK2Q9HC23 129 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 ZNF226Q9NYT6 803 aa9.36□□□□□ -0.91
RDH11-210ENST00000557331 PTBP2Q9UKA9 531 aaKnown RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 CNOT11Q9UKZ1 510 aaKnown RBP9.36□□□□□ -0.91
RDH11-210ENST00000557331 C2orf92A0A1B0GVN3 265 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 CDC7O00311 574 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 OR10H2O60403 315 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 RCBTB2O95199 551 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 GPR75O95800 540 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 TBX6O95947 436 aaPredicted RBP9.35□□□□□ -0.91
RDH11-210ENST00000557331 CRHP06850 196 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 TRPC1P48995 793 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 ATP6V0D1P61421 351 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 IRF8Q02556 426 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 SNTA1Q13424 505 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 PPP1R7Q15435 360 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 PDK4Q16654 411 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 RNASEH2BQ5TBB1 312 aaKnown RBP9.35□□□□□ -0.91
RDH11-210ENST00000557331 TMEM81Q6P7N7 255 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 GPR180Q86V85 440 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 KRTAP1-3Q8IUG1 177 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 AGGF1Q8N302 714 aaeCLIP9.35□□□□□ -0.91
RDH11-210ENST00000557331 ZCCHC7Q8N3Z6 543 aaKnown RBP9.35□□□□□ -0.91
RDH11-210ENST00000557331 WNT2BQ93097 391 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 RGMAQ96B86 450 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 TSPAN17Q96FV3 270 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 WDYHV1Q96HA8 205 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 TMEM41AQ96HV5 264 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 F2RL3Q96RI0 385 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 TRIB1Q96RU8 372 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 MAPKAP1Q9BPZ7 522 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 MS4A8Q9BY19 250 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 WWTR1Q9GZV5 400 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 WDR41Q9HAD4 459 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 ZNF490Q9ULM2 529 aaPredicted RBP9.35□□□□□ -0.91
RDH11-210ENST00000557331 CFL2Q9Y281 166 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 C15orf41Q9Y2V0 281 aa9.35□□□□□ -0.91
RDH11-210ENST00000557331 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
RDH11-210ENST00000557331 NPEPPSL1A6NEC2 478 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 MSTNO14793 375 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 ACSL3O95573 720 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 S100BP04271 92 aaPredicted RBP9.34□□□□□ -0.91
RDH11-210ENST00000557331 RHOXF2BP0C7M4 288 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 SLC35E2BP0CK96 405 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 SLC35E2P0CK97 266 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 KRT15P19012 456 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 CXCR5P32302 372 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 MC3RP41968 323 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 PIK3CBP42338 1070 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 GDF5P43026 501 aa9.34□□□□□ -0.91
RDH11-210ENST00000557331 SSR2P43308 183 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms