RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 TMPRSS11EQ9UL52 423 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 SLC27A6Q9Y2P4 619 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 SPACA6W5XKT8 324 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 NUDT14O95848 222 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 ASGR2P07307 311 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 CD72P21854 359 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 CSTF2P33240 577 aaKnown RBP eCLIP14.13□□□□□ -0.15
CUX1-215ENST00000556210 DBPQ10586 325 aaPredicted RBP14.13□□□□□ -0.15
CUX1-215ENST00000556210 STEAP3Q658P3 488 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 BHLHB9Q6PI77 547 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 ZC3H14Q6PJT7 736 aaKnown RBP14.13□□□□□ -0.15
CUX1-215ENST00000556210 ZNF517Q6ZMY9 492 aaPredicted RBP14.13□□□□□ -0.15
CUX1-215ENST00000556210 PRSS48Q7RTY5 328 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 FAM83FQ8NEG4 500 aaPredicted RBP14.13□□□□□ -0.15
CUX1-215ENST00000556210 B3GNT7Q8NFL0 401 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 OR52N2Q8NGI0 321 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 GPR151Q8TDV0 419 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 PIK3R3Q92569 461 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 TRNT1Q96Q11 434 aaKnown RBP14.13□□□□□ -0.15
CUX1-215ENST00000556210 LGR4Q9BXB1 951 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 MAGIXQ9H6Y5 334 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 SIRT5Q9NXA8 310 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 NCKAP1Q9Y2A7 1128 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 CARD8Q9Y2G2 431 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 N6AMT1Q9Y5N5 214 aa14.13□□□□□ -0.15
CUX1-215ENST00000556210 YY2O15391 372 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 GPR37L1O60883 481 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 GUCY1B2O75343 617 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TLX1P31314 330 aaPredicted RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 CD83Q01151 205 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 ZNF45Q02386 682 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 C1QTNF12Q5T7M4 302 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 LAPTM4BQ86VI4 370 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CDK20Q8IZL9 346 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TTYH2Q9BSA4 534 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 RSPH9Q9H1X1 276 aaPredicted RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 PRMT2P55345 433 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 QPRTQ15274 297 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 GTF2IRD2BQ6EKJ0 949 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 C8orf82Q6P1X6 216 aaPredicted RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 KRT74Q7RTS7 529 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 DGLUCYQ7Z3D6 616 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 GTF2IRD2Q86UP8 949 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 HMGB4Q8WW32 186 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 CHFRQ96EP1 664 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TMEM246Q9BRR3 403 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CXorf36Q9H7Y0 433 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 P2RX2Q9UBL9 471 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 SLC23A2Q9UGH3 650 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CFL2Q9Y281 166 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TRBV4-1A0A0J9YWV2 114 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 A0A1W2PPK0 400 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TRIM64CA6NLI5 447 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 LAMP2P13473 410 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 PRLHRP49683 370 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 ARL4DP49703 201 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CRISP1P54107 249 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 KCNC3Q14003 757 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CTF1Q16619 201 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 HNRNPA1L2Q32P51 320 aaKnown RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 KHDRBS2Q5VWX1 349 aaKnown RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 FAM83HQ6ZRV2 1179 aaPredicted RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 METTL27Q8N6F8 245 aaPredicted RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 TMCO6Q96DC7 493 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 LRR1Q96L50 414 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 SLC7A5P2Q9GIP4 190 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 NDUFAF4Q9P032 175 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 MIA3Q5JRA6 1907 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 AGAP5A6NIR3 686 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 FAM47E-STBD1D6RA91 191 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 CTDSP2O14595 271 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 PLOD3O60568 738 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 GASTP01350 101 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 SSTR4P31391 388 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 RPL4P36578 427 aaKnown RBP14.12□□□□□ -0.15
CUX1-215ENST00000556210 PLET1Q6UQ28 207 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 FRMD1Q8N878 549 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 SLC30A2Q9BRI3 323 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 SPATA5L1Q9BVQ7 753 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 IFT52Q9Y366 437 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 OR10H1Q9Y4A9 318 aa14.12□□□□□ -0.15
CUX1-215ENST00000556210 TRBV5-4A0A0C4DH59 114 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ZNF821O75541 412 aaPredicted RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 CSNK2A2P19784 350 aaPredicted RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 LIPAP38571 399 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 MMP12P39900 470 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 GPR4P46093 362 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 HNRNPFP52597 415 aaKnown RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 RGS1Q08116 209 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ASCC1Q8N9N2 400 aaKnown RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 GATAD2BQ8WXI9 593 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 RERGQ96A58 199 aaPredicted RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 OR5M11Q96RB7 305 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 TSSK6Q9BXA6 273 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ASPNQ9BXN1 380 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ZNF624Q9P2J8 865 aaPredicted RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 GSTK1Q9Y2Q3 226 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms